Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.63■□□□□ 0.25
Trove2O08848 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trove2O08848 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.63■□□□□ 0.25
Trove2O08848 Prob1-201ENSMUST00000097619 3021 ntBASIC16.63■□□□□ 0.25
Trove2O08848 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trove2O08848 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trove2O08848 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.62■□□□□ 0.25
Trove2O08848 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.62■□□□□ 0.25
Trove2O08848 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trove2O08848 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trove2O08848 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trove2O08848 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trove2O08848 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trove2O08848 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trove2O08848 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.62■□□□□ 0.25
Trove2O08848 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.61■□□□□ 0.25
Trove2O08848 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.61■□□□□ 0.25
Trove2O08848 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.61■□□□□ 0.25
Trove2O08848 Timm23-208ENSMUST00000226683 750 ntBASIC16.61■□□□□ 0.25
Trove2O08848 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trove2O08848 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.61■□□□□ 0.25
Trove2O08848 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trove2O08848 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Trove2O08848 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.6■□□□□ 0.25
Trove2O08848 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.6■□□□□ 0.25
Trove2O08848 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.6■□□□□ 0.25
Trove2O08848 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trove2O08848 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trove2O08848 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trove2O08848 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.59■□□□□ 0.25
Trove2O08848 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Gm715-201ENSMUST00000117865 831 ntBASIC16.59■□□□□ 0.25
Trove2O08848 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.59■□□□□ 0.25
Trove2O08848 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trove2O08848 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trove2O08848 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trove2O08848 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Trove2O08848 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.59■□□□□ 0.25
Trove2O08848 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trove2O08848 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms