Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Gm13216-201ENSMUST00000117145 591 ntBASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Gm19164-201ENSMUST00000210667 640 ntBASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col4a6B1AVK5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a6B1AVK5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.52■□□□□ 0.24
Col4a6B1AVK5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a6B1AVK5 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.52■□□□□ 0.24
Col4a6B1AVK5 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.52■□□□□ 0.24
Col4a6B1AVK5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a6B1AVK5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col4a6B1AVK5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a6B1AVK5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Gm18246-201ENSMUST00000221023 728 ntBASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a6B1AVK5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a6B1AVK5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Gm13365-201ENSMUST00000121188 973 ntBASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Mir6990-201ENSMUST00000183724 91 ntBASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Gm20553-201ENSMUST00000204205 844 ntBASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.5■□□□□ 0.23
Col4a6B1AVK5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a6B1AVK5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms