Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Gm5312-201ENSMUST00000203728 547 ntBASIC17.88■□□□□ 0.45
Krt28A6BLY7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt28A6BLY7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Gm8969-201ENSMUST00000199694 526 ntBASIC17.87■□□□□ 0.45
Krt28A6BLY7 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.87■□□□□ 0.45
Krt28A6BLY7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt28A6BLY7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.87■□□□□ 0.45
Krt28A6BLY7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.87■□□□□ 0.45
Krt28A6BLY7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.86■□□□□ 0.45
Krt28A6BLY7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt28A6BLY7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.85■□□□□ 0.45
Krt28A6BLY7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Gm17968-201ENSMUST00000194902 784 ntBASIC17.85■□□□□ 0.45
Krt28A6BLY7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt28A6BLY7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.84■□□□□ 0.45
Krt28A6BLY7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms