Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Mir770-201ENSMUST00000103252 94 ntBASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lnp1A0A1B0GSK3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lnp1A0A1B0GSK3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lnp1A0A1B0GSK3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lnp1A0A1B0GSK3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm6345-202ENSMUST00000180900 204 ntBASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms