Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Il3ra-202ENSMUST00000223589 738 ntBASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm10013-201ENSMUST00000106074 672 ntBASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Mir5130-201ENSMUST00000175160 84 ntBASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm9731-201ENSMUST00000209480 747 ntBASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.65□□□□□ -0.06
Pcdhgb8A0A140LI48 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm18032-201ENSMUST00000222541 538 ntBASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhgb8A0A140LI48 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm6659-201ENSMUST00000174752 547 ntBASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdhgb8A0A140LI48 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms