Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm26524-201ENSMUST00000192339 390 ntBASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-3A0A0B4J1H2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms