Protein–RNA interactions for Protein: A0A087WP35

Gm28919, Predicted gene 28919, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28919A0A087WP35 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Gm12085-201ENSMUST00000119263 940 ntBASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28919A0A087WP35 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28919A0A087WP35 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Actl10-202ENSMUST00000226583 1501 ntBASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Gm38027-201ENSMUST00000192315 235 ntBASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28919A0A087WP35 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28919A0A087WP35 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Asic1-205ENSMUST00000228185 1818 ntBASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm28919A0A087WP35 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms