Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Gm9988-201ENSMUST00000069786 435 ntBASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav4n-4A0A075B615 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Gm15546-201ENSMUST00000122095 826 ntBASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Reep4-203ENSMUST00000226563 1444 ntBASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4n-4A0A075B615 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms