Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-1210P-201ENST00000363775 107 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-224P-201ENST00000384055 107 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 CBX3P9-201ENST00000402326 552 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-1025P-201ENST00000410629 104 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 MTCO3P5-201ENST00000433620 714 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 RPS29P28-201ENST00000446439 141 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 AL606517.1-201ENST00000446914 387 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 MTCO1P27-201ENST00000448269 226 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 RPL23AP35-201ENST00000451906 501 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-953P-201ENST00000459154 107 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 RPL30P6-201ENST00000475925 342 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 YWHAEP4-201ENST00000505390 198 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 MTCYBP40-201ENST00000509390 1135 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 AC008837.2-201ENST00000513076 418 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 MTCO3P27-201ENST00000514397 196 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 DEFB108A-201ENST00000530110 222 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 SUB1P4-201ENST00000566062 339 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 MTCYBP33-201ENST00000575007 1130 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 AC136618.2-201ENST00000575091 400 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 AC123912.5-201ENST00000605470 343 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 AL512598.1-201ENST00000610158 273 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 AL355472.4-201ENST00000610233 626 ntBASIC0.97□□□□□ -2.25
TMEM56-RWDD3S4R434 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 MTND5P9-201ENST00000503854 1755 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 Y_RNA.40-201ENST00000362645 93 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 RNA5SP493-201ENST00000364115 91 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 SNORA4.3-201ENST00000365564 137 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 Y_RNA.534-201ENST00000384599 112 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 FCF1P10-201ENST00000407590 479 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 MIR320C1-201ENST00000408566 88 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 MIR1261-201ENST00000408659 82 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AL135790.2-201ENST00000437701 267 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 RPL23AP76-201ENST00000441860 458 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 USP9YP17-201ENST00000444617 696 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 MTCO2P25-201ENST00000447065 681 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 RPS26P55-201ENST00000471178 356 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 RPL30P7-201ENST00000479312 323 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 RNU6-991P-201ENST00000516168 107 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 RNU6-1315P-201ENST00000517187 99 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AP000889.1-201ENST00000530968 660 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AP003122.4-201ENST00000530980 758 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC087894.1-201ENST00000538359 518 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 RAB11AP2-201ENST00000545905 639 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 SNORA77B-201ENST00000578179 125 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC073413.2-201ENST00000604332 360 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC008993.2-201ENST00000631744 806 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC099654.8-201ENST00000637757 681 ntBASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.96□□□□□ -2.26
TMEM56-RWDD3S4R434 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 SNORD14B-201ENST00000364533 90 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 RNU6-487P-201ENST00000365430 104 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 RNU6-622P-201ENST00000384272 103 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 MIR29B2-201ENST00000385055 81 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AC119751.3-201ENST00000399720 670 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 MIR1267-201ENST00000408723 78 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AL591704.1-201ENST00000432574 275 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AL121890.1-201ENST00000435457 205 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AC087477.1-201ENST00000465747 340 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 RN7SL429P-201ENST00000479090 223 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 MTND1P3-201ENST00000484956 952 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 RN7SL489P-201ENST00000486185 223 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 RN7SL327P-201ENST00000488659 223 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 RPL30P1-201ENST00000488676 339 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 HMGB1P30-201ENST00000492455 606 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AC113347.3-201ENST00000509113 148 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AC092325.1-201ENST00000566449 554 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 MIR3169-201ENST00000578032 83 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AC023043.2-201ENST00000589678 1026 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 AC092574.1-201ENST00000609771 420 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 RN7SL853P-201ENST00000617250 223 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 MIR1248-201ENST00000629190 106 ntBASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.95□□□□□ -2.26
TMEM56-RWDD3S4R434 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
TMEM56-RWDD3S4R434 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.94□□□□□ -2.26
TMEM56-RWDD3S4R434 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TMEM56-RWDD3S4R434 RNU6-414P-201ENST00000363705 104 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms