Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.14□□□□□ -1.59
GTF3C3Q9Y5Q9 RMST_6.1-201ENST00000611980 203 ntBASIC5.14□□□□□ -1.59
GTF3C3Q9Y5Q9 AC091903.1-201ENST00000624322 454 ntBASIC5.14□□□□□ -1.59
GTF3C3Q9Y5Q9 SNORA43.4-201ENST00000629559 138 ntBASIC5.14□□□□□ -1.59
GTF3C3Q9Y5Q9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
GTF3C3Q9Y5Q9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
GTF3C3Q9Y5Q9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 RNU6-1210P-201ENST00000363775 107 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 Y_RNA.326-201ENST00000365176 113 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 SNORA12.2-201ENST00000391040 156 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 SNORA11.3-201ENST00000408471 128 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 AL162591.2-201ENST00000449634 317 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 RPL21P126-201ENST00000470049 478 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 RNU6-120P-201ENST00000516077 103 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 RN7SKP295-201ENST00000517264 153 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 AC027176.1-201ENST00000560204 514 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 AC025627.2-201ENST00000576220 160 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 AL606490.9-201ENST00000603331 271 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 RPL23AP88-201ENST00000605759 454 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 uc_338.13-201ENST00000618243 179 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 AL138825.1-201ENST00000618587 192 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 SNORA11.6-201ENST00000619030 128 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 MIR7157-201ENST00000635801 60 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 MIR7515-201ENST00000637837 67 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 MIR4302-201ENST00000638058 60 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 AC092435.3-201ENST00000565538 3654 ntBASIC5.13□□□□□ -1.59
GTF3C3Q9Y5Q9 SNORD115-32-201ENST00000364079 82 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 AL358453.1-201ENST00000422522 250 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 AC012306.1-201ENST00000423267 114 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 AC092423.1-201ENST00000430165 186 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 AC006539.3-201ENST00000454258 129 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 RN7SL172P-201ENST00000460535 303 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 RNU5F-2P-201ENST00000516066 82 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 RNA5SP208-201ENST00000516156 78 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 AL137843.1-201ENST00000605078 385 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 SNORD98-201ENST00000636377 67 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 MIR7153-201ENST00000637758 57 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 AC099654.10-201ENST00000640395 161 ntBASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GTF3C3Q9Y5Q9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 OR5P1P-201ENST00000299512 925 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 SNORA68.1-201ENST00000364537 132 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 SNORD21-201ENST00000383953 95 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AL391361.1-201ENST00000405580 489 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 MIR1289-1-201ENST00000408836 144 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 RNU4-6P-201ENST00000410804 122 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 PMCHL1-202ENST00000423102 261 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 RSL24D1P6-201ENST00000426934 401 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 MICF-203ENST00000432679 129 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AC009296.1-201ENST00000443146 155 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 RPS4XP2-201ENST00000458402 793 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AC087477.1-201ENST00000465747 340 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AC092324.1-201ENST00000468671 324 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AC090525.1-201ENST00000479116 478 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AC105137.1-201ENST00000484355 562 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AC096576.1-201ENST00000489014 359 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 HMGB1P35-201ENST00000503360 598 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 PHBP14-201ENST00000512887 367 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 ATP5LP3-201ENST00000514223 304 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 RNU2-53P-201ENST00000516257 147 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 MIR3923-201ENST00000579521 83 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 MIR5684-201ENST00000585074 65 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 AC006157.1-201ENST00000611750 366 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 MFSD8-242ENST00000641690 4199 ntBASIC5.11□□□□□ -1.59
GTF3C3Q9Y5Q9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 Y_RNA.39-201ENST00000362620 98 ntBASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 RNU5B-2P-201ENST00000363036 113 ntBASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 Y_RNA.405-201ENST00000383979 100 ntBASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 Y_RNA.451-201ENST00000384200 100 ntBASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 Y_RNA.524-201ENST00000384564 100 ntBASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 Y_RNA.561-201ENST00000384694 100 ntBASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 RNA5SP397-201ENST00000391323 118 ntBASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 CBX3P9-201ENST00000402326 552 ntBASIC5.1□□□□□ -1.59
GTF3C3Q9Y5Q9 AC108032.1-201ENST00000416706 207 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms