Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 CEACAMP4-201ENST00000457676 421 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC034236.1-201ENST00000469891 373 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 Y_RNA.661-201ENST00000516003 99 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-307P-201ENST00000516743 106 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 BNIP3P16-201ENST00000589779 534 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC116312.1-201ENST00000606841 314 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC005014.2-201ENST00000607795 599 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC007485.1-201ENST00000616755 206 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 RNU1-75P-201ENST00000347264 129 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-527P-201ENST00000363425 104 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-198P-201ENST00000384258 104 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 SNORD116-20-201ENST00000384529 92 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 Y_RNA.533-201ENST00000384596 114 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 MCFD2P1-201ENST00000417812 300 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 MRPS18CP6-201ENST00000423587 223 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AP000907.1-201ENST00000428428 510 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AL160004.2-201ENST00000432935 350 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 MTND4P19-201ENST00000446659 478 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 NIPA2P5-201ENST00000452282 464 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AC068781.1-201ENST00000488231 618 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 RPL23AP49-201ENST00000492925 468 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AC116655.1-201ENST00000508324 901 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 SNORA31.18-201ENST00000517043 134 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AC006504.6-201ENST00000590142 199 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AL137849.1-201ENST00000604767 169 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AC091925.1-201ENST00000623204 462 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 MTND4P1-201ENST00000457501 1466 ntBASIC4.1□□□□□ -1.75
R3HCC1Q9Y3T6 ADAM3A-203ENST00000461344 2157 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-1280P-201ENST00000365211 107 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-1160P-201ENST00000384546 104 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 AL591034.2-201ENST00000402839 359 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 CYCSP19-201ENST00000411715 316 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 NDUFB1P1-201ENST00000435191 180 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 RPS3AP46-201ENST00000448352 682 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 MRPL42P6-201ENST00000486397 371 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 RNU1-45P-201ENST00000517191 141 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-988P-201ENST00000519081 107 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 AC006199.1-201ENST00000548728 219 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 HMGB1P24-202ENST00000615653 685 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 AC034229.5-201ENST00000624258 185 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 AL021368.2-201ENST00000606125 5352 ntBASIC4.09□□□□□ -1.75
R3HCC1Q9Y3T6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
R3HCC1Q9Y3T6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 SNORD50.1-201ENST00000362987 71 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 SNORA73.2-201ENST00000364946 201 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 SNORA62.3-201ENST00000365110 153 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 RNU6-805P-201ENST00000365643 106 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 RNY1P14-201ENST00000384426 108 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC008267.5-201ENST00000424928 265 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 RNU6-1137P-201ENST00000517073 99 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 RNU6-264P-201ENST00000517134 104 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC023632.4-201ENST00000517783 191 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC010186.2-204ENST00000537668 439 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC093010.3-201ENST00000570269 15214 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AL355802.3-201ENST00000607571 545 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC012531.5-201ENST00000611375 151 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC241585.2-209ENST00000638217 143 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 AC058791.1-201ENST00000608412 3198 ntBASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
R3HCC1Q9Y3T6 MTND5P27-201ENST00000428871 1720 ntBASIC4.07□□□□□ -1.76
R3HCC1Q9Y3T6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
R3HCC1Q9Y3T6 RNU6-227P-201ENST00000362865 103 ntBASIC4.07□□□□□ -1.76
R3HCC1Q9Y3T6 Y_RNA.422-201ENST00000384054 114 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms