Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC090582.1-201ENST00000636321 199 ntBASIC2.34□□□□□ -2.03
RPH3AQ9Y2J0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.34□□□□□ -2.04
RPH3AQ9Y2J0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.34□□□□□ -2.04
RPH3AQ9Y2J0 HAUS6P2-201ENST00000433254 2404 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 RNU6-169P-201ENST00000365336 107 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 SNORA75B-201ENST00000384053 137 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 MIR1289-2-201ENST00000408360 111 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 RNU6-248P-201ENST00000410720 107 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 RNA5SP111-201ENST00000411386 101 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC009963.1-201ENST00000417265 157 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 Z98742.3-201ENST00000418637 326 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 MTCO2P34-201ENST00000421994 607 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC133104.1-201ENST00000429100 218 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 RPL31P35-201ENST00000431058 377 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 MTCO2P16-201ENST00000436962 677 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 USP9YP29-201ENST00000445112 563 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AL360221.1-201ENST00000445989 335 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC006026.2-201ENST00000457376 180 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC140059.1-201ENST00000489238 361 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AP004607.1-201ENST00000524456 203 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC006362.1-201ENST00000567392 174 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AL391840.1-201ENST00000571144 367 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC073648.5-201ENST00000603502 305 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC008121.3-201ENST00000618726 433 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC010378.1-201ENST00000619270 362 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC025034.2-201ENST00000623264 286 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 AC241585.2-209ENST00000638217 143 ntBASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPH3AQ9Y2J0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 MTND5P17-201ENST00000418405 1603 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 RNU6-108P-201ENST00000365558 107 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 RNU1-148P-201ENST00000384472 162 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 CISD1P1-201ENST00000393907 327 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 MTND3P17-201ENST00000416968 344 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC138623.1-201ENST00000418060 216 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 HIGD1AP2-201ENST00000446367 280 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC112206.3-201ENST00000514578 389 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 RNU6-123P-201ENST00000516163 102 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 SCARNA24.1-201ENST00000516465 137 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC109329.1-201ENST00000518744 317 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AP003072.2-201ENST00000527756 676 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 RPS3AP23-202ENST00000574601 686 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 MIR4648-201ENST00000580107 72 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC097065.2-201ENST00000608159 533 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC006566.1-201ENST00000608943 513 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 CTSLP2-204ENST00000629029 392 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 ZNF72P-201ENST00000425869 1908 ntBASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
RPH3AQ9Y2J0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 SNORA24.1-201ENST00000384401 135 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 RNU6-843P-201ENST00000384454 104 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 RNU6-456P-201ENST00000384493 107 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 MIR95-201ENST00000385072 81 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 AC009238.1-201ENST00000442165 424 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 AC009237.6-201ENST00000446969 424 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 HMGB1P30-201ENST00000492455 606 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 AC093534.1-201ENST00000504977 132 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 MTCO2P4-201ENST00000517968 247 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 AC090572.1-201ENST00000519251 160 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 AC243972.3-201ENST00000539655 198 ntBASIC2.31□□□□□ -2.04
RPH3AQ9Y2J0 CR383656.8-201ENST00000549046 145 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms