Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC096745.1-201ENST00000509945 370 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 SNORA31.26-201ENST00000517250 137 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 AC104027.1-201ENST00000521887 300 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 AC025423.5-201ENST00000550230 219 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 AC005476.1-201ENST00000554427 397 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 NUTF2P8-201ENST00000604593 363 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-85P-201ENST00000605989 107 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.812-201ENST00000610788 101 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.784-201ENST00000613803 101 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.787-201ENST00000616522 101 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.780-201ENST00000617336 101 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.801-201ENST00000619005 101 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 AC134503.1-201ENST00000633048 54 ntBASIC3.46□□□□□ -1.86
SSX2IPQ9Y2D8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.187-201ENST00000363918 113 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-7-201ENST00000364784 107 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-8-201ENST00000365467 107 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 snosnR66.1-201ENST00000391095 99 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AL031121.1-201ENST00000406553 254 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 RPL5P18-201ENST00000406671 891 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 UBE2D3P2-201ENST00000424409 445 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AC092047.1-201ENST00000424997 240 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AL353729.1-201ENST00000425044 720 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 RPL7P37-201ENST00000425095 738 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 UBE2V1P4-201ENST00000425374 344 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AL645568.3-201ENST00000433683 316 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 NDUFB1P2-201ENST00000449477 176 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 CECR9-201ENST00000453421 199 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.653-201ENST00000459091 95 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AC011005.2-201ENST00000487324 359 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AC116337.1-201ENST00000509680 687 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 RNU1-54P-201ENST00000517181 120 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 H3F3AP1-201ENST00000559984 334 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 MIR4513-201ENST00000581077 86 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 MIR4506-201ENST00000584693 77 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AC078795.3-201ENST00000602913 472 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 CYP2C61P-201ENST00000604072 290 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AC133104.2-201ENST00000615272 193 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AC098657.3-201ENST00000620434 263 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 AC090740.1-201ENST00000623193 2262 ntBASIC3.45□□□□□ -1.86
SSX2IPQ9Y2D8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC138393.1-203ENST00000327086 343 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.128-201ENST00000363391 112 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.138-201ENST00000363462 102 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.146-201ENST00000363549 102 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-1188P-201ENST00000363795 107 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 SNORD42.2-201ENST00000365570 69 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 RNU2-68P-201ENST00000410878 191 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-293P-201ENST00000411259 106 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC245054.2-201ENST00000415639 319 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 HMGB1P9-201ENST00000429856 646 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 MYL8P-204ENST00000431574 518 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 NDUFB4P6-201ENST00000436819 366 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 Y_RNA.639-201ENST00000458981 102 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC027575.1-201ENST00000481064 460 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC005741.1-201ENST00000511094 432 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 RNU1-86P-201ENST00000516108 154 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 SCARNA15.1-201ENST00000516384 125 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 RNU1-107P-201ENST00000516617 154 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-1016P-201ENST00000516689 94 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 RNU6-1282P-201ENST00000516735 96 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 MIR2276-201ENST00000516886 89 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 RNA5SP165-201ENST00000517142 115 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 OR1M4P-201ENST00000589199 287 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC136601.2-201ENST00000604356 474 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC080078.3-201ENST00000605407 463 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AL627309.6-201ENST00000606857 840 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 MIR6128-201ENST00000615528 109 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AC073476.4-201ENST00000628409 72 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 MIR622-201ENST00000638396 96 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 AL049641.1-201ENST00000441055 1948 ntBASIC3.44□□□□□ -1.86
SSX2IPQ9Y2D8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 MTND4P27-201ENST00000450813 1354 ntBASIC3.43□□□□□ -1.86
SSX2IPQ9Y2D8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms