Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU6-1159P-201ENST00000362933 107 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 RNA5SP130-201ENST00000364431 114 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 RNU6-1141P-201ENST00000364520 107 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 RNU6-1175P-201ENST00000365200 107 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 Y_RNA.446-201ENST00000384178 104 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 AL606753.1-201ENST00000427435 87 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 MTCO1P5-201ENST00000433573 344 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 RPL23AP81-201ENST00000455252 467 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 Y_RNA.638-201ENST00000459374 113 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 SNORA40.9-201ENST00000515895 93 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 RN7SL600P-201ENST00000581811 299 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 AC011921.3-201ENST00000605540 361 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 AC006133.1-201ENST00000617106 264 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NOD1Q9Y239 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NOD1Q9Y239 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 Y_RNA.230-201ENST00000364348 109 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 RNU6-1280P-201ENST00000365211 107 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 SNORA36A-201ENST00000384221 132 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 MIR670-201ENST00000390142 98 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 AL592291.1-201ENST00000403830 352 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 MIR548I2-201ENST00000408348 149 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 RN7SKP177-201ENST00000410567 355 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 NDUFS5P4-201ENST00000412983 318 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 AL157831.1-201ENST00000426134 473 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 AL358075.3-201ENST00000426289 226 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 SETP5-201ENST00000437270 562 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 RN7SL542P-201ENST00000467147 294 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 AP001025.1-201ENST00000486139 332 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 Y_RNA.662-201ENST00000516028 97 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 AL451007.1-201ENST00000595491 289 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 AC006001.4-201ENST00000622243 395 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 AC021753.1-201ENST00000635724 168 ntBASIC4.76□□□□□ -1.65
NOD1Q9Y239 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NOD1Q9Y239 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NOD1Q9Y239 AL133243.3-201ENST00000617415 3004 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NOD1Q9Y239 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NOD1Q9Y239 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.82-201ENST00000363000 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.92-201ENST00000363043 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.235-201ENST00000364412 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.306-201ENST00000365015 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.312-201ENST00000365089 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.322-201ENST00000365151 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 U3.19-201ENST00000390893 196 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 RN7SKP61-201ENST00000410642 295 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 POLR2KP2-201ENST00000438155 177 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.650-201ENST00000459002 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 RN7SL604P-201ENST00000492589 296 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 RPS27AP10-201ENST00000496103 208 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 AC099522.1-202ENST00000514718 367 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 SNORA27.4-201ENST00000516650 95 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.777-201ENST00000516982 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 SNORA31.23-201ENST00000517219 133 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 RPL21P9-201ENST00000556149 474 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 KLKP1-201ENST00000595979 403 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.771-201ENST00000598668 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 Y_RNA.789-201ENST00000622480 102 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NOD1Q9Y239 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.75□□□□□ -1.65
NOD1Q9Y239 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NOD1Q9Y239 USP8P1-201ENST00000494673 3183 ntBASIC4.75□□□□□ -1.65
NOD1Q9Y239 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NOD1Q9Y239 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NOD1Q9Y239 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms