Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SMC3Q9UQE7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SMC3Q9UQE7 RNU1-72P-201ENST00000362976 153 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 Y_RNA.381-201ENST00000365666 102 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 RNU2-2P-201ENST00000410396 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 RNU2-20P-201ENST00000410425 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 Y_RNA.598-201ENST00000410480 95 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 RNA5SP489-201ENST00000410986 109 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC097463.2-201ENST00000421074 142 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AL353689.1-201ENST00000438895 199 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 Y_RNA.689-201ENST00000516589 107 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 Y_RNA.695-201ENST00000516715 107 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 SNORA31.19-201ENST00000517079 126 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AL356057.1-201ENST00000533798 831 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC025678.1-201ENST00000567861 338 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 MIR1273C-201ENST00000578669 77 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC040904.1-201ENST00000590850 223 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC006566.1-201ENST00000608943 513 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 AC012360.2-201ENST00000609349 391 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.15-201ENST00000611544 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.16-201ENST00000613119 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.12-201ENST00000613778 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.20-201ENST00000613956 192 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.9-201ENST00000615427 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.11-201ENST00000616345 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.2-201ENST00000616535 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.3-201ENST00000617785 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.19-201ENST00000618602 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 RNU2-1-201ENST00000618664 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.6-201ENST00000619225 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.5-201ENST00000619465 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 U2.10-201ENST00000620268 191 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SMC3Q9UQE7 Z75746.1-201ENST00000440243 2080 ntBASIC2.25□□□□□ -2.05
SMC3Q9UQE7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 RNU6-1280P-201ENST00000365211 107 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 SNORA75B-201ENST00000384053 137 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 SNORD116-1-201ENST00000384335 95 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 Y_RNA.553-201ENST00000384670 102 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AL049545.1-201ENST00000401856 572 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AL356432.1-201ENST00000405809 419 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 RNU6-1025P-201ENST00000410629 104 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 RNU6-248P-201ENST00000410720 107 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 RNU2-8P-201ENST00000410727 190 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AC127391.1-201ENST00000411737 98 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 ELOCP4-201ENST00000420090 333 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AL078601.1-201ENST00000444542 271 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AC003071.1-201ENST00000451219 789 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 FABP5P13-201ENST00000452144 328 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 RBBP4P6-201ENST00000508098 202 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 SMURF2P1-201ENST00000514992 481 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 Y_RNA.672-201ENST00000516289 104 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 Y_RNA.688-201ENST00000516565 95 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 SNORA18.6-201ENST00000516792 115 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AL157871.3-201ENST00000557231 293 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AC006362.1-201ENST00000567392 174 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 MIR3126-201ENST00000577443 74 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 DEFB131E-202ENST00000602581 683 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 MIR15A-201ENST00000607334 83 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AL133173.2-201ENST00000614270 90 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AL158063.1-201ENST00000615349 536 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AC138627.2-201ENST00000624202 601 ntBASIC2.24□□□□□ -2.05
SMC3Q9UQE7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC3Q9UQE7 MIR449A-201ENST00000362113 91 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 Y_RNA.33-201ENST00000362591 102 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 RNU6-395P-201ENST00000365662 106 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SMC3Q9UQE7 SNORA75-201ENST00000384158 137 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 SNORA40C-201ENST00000391285 128 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 RNU2-63P-201ENST00000410792 194 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AL353621.1-201ENST00000418219 243 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AL360221.1-201ENST00000445989 335 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 BTF3P15-201ENST00000455606 336 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 SNRPFP4-201ENST00000456366 242 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 TPT1P7-201ENST00000458300 517 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 RPL36AP48-201ENST00000485521 314 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms