Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC060788.1-201ENST00000521318 469 ntBASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 AP004607.1-201ENST00000524456 203 ntBASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 MIR3682-201ENST00000581338 84 ntBASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 AL138889.2-201ENST00000603883 242 ntBASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 AC063944.3-201ENST00000609969 533 ntBASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 AC009090.3-201ENST00000616553 565 ntBASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 AL160394.1-201ENST00000624765 724 ntBASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 MIR3529-201ENST00000637713 78 ntBASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
NPIPA1Q9UND3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2□□□□□ -2.09
NPIPA1Q9UND3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
NPIPA1Q9UND3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NPIPA1Q9UND3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NPIPA1Q9UND3 RNU4-21P-201ENST00000362802 126 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NPIPA1Q9UND3 SNORD116-20-201ENST00000384529 92 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 Y_RNA.576-201ENST00000384781 102 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 RNA5SP270-201ENST00000411361 118 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2□□□□□ -2.09
NPIPA1Q9UND3 CALM2P2-201ENST00000428512 440 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AL445567.1-201ENST00000439121 144 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AC009238.1-201ENST00000442165 424 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AC009237.6-201ENST00000446969 424 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AL360271.2-201ENST00000447710 161 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AL136380.1-201ENST00000447970 162 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 NDUFB1P2-201ENST00000449477 176 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 GAPDHP17-201ENST00000449858 1001 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AL033528.1-201ENST00000453780 140 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2□□□□□ -2.09
NPIPA1Q9UND3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2□□□□□ -2.09
NPIPA1Q9UND3 AC010486.2-201ENST00000505572 483 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 Y_RNA.687-201ENST00000516558 91 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AC118273.2-201ENST00000532092 465 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 CYCSP26-201ENST00000534107 320 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 MIR3126-201ENST00000577443 74 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 RPL30P11-203ENST00000598995 310 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AL713866.2-201ENST00000603579 219 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 AC021646.1-201ENST00000605469 484 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 NDUFA8P1-201ENST00000605525 367 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 MIR203B-201ENST00000636080 86 ntBASIC2□□□□□ -2.09
NPIPA1Q9UND3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NPIPA1Q9UND3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
NPIPA1Q9UND3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 RNU6-371P-201ENST00000364283 108 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 RNU6-384P-201ENST00000364900 104 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 RNU6-116P-201ENST00000384042 109 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 RNU6-843P-201ENST00000384454 104 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 RNU1-57P-201ENST00000384491 166 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 SNORA26.8-201ENST00000391306 124 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AL079342.1-201ENST00000401460 267 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 SNORD23.1-201ENST00000408212 104 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AL591806.2-201ENST00000433122 173 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC000111.3-201ENST00000433478 193 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AL022238.1-201ENST00000442557 355 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 SNRPGP9-201ENST00000456025 225 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC117503.1-201ENST00000472241 394 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 RPL21P99-201ENST00000480369 423 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC104806.1-201ENST00000508720 308 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC107222.1-201ENST00000510899 637 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC090572.1-201ENST00000519251 160 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 OR5AL2P-201ENST00000532185 920 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC136619.2-201ENST00000563361 631 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 MIR5692A1-201ENST00000580523 69 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC098848.2-201ENST00000588023 330 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC073410.2-201ENST00000603240 332 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 MIR98-201ENST00000606724 119 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 AC093648.1-201ENST00000623546 606 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 U6.114-201ENST00000636407 96 ntBASIC1.99□□□□□ -2.09
NPIPA1Q9UND3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 RNY3P10-201ENST00000384764 102 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 GSTA9P-201ENST00000406231 611 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AC008267.5-201ENST00000424928 265 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 RPL31P35-201ENST00000431058 377 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 MTCYBP1-201ENST00000454315 1119 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 snoU13.23-201ENST00000458863 104 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 SNORA4.4-201ENST00000515921 135 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 HSPE1P18-201ENST00000517602 280 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 CR383656.8-201ENST00000549046 145 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AC015712.3-201ENST00000559380 164 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AC145350.1-201ENST00000567426 208 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 DEFB122-202ENST00000569013 197 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 LRRC37A5P-203ENST00000580181 585 ntBASIC1.98□□□□□ -2.09
NPIPA1Q9UND3 AC025754.2-201ENST00000606491 432 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms