Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.45□□□□□ -1.86
DKK3Q9UBP4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
DKK3Q9UBP4 AC040896.1-201ENST00000613819 479 ntBASIC3.45□□□□□ -1.86
DKK3Q9UBP4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.45□□□□□ -1.86
DKK3Q9UBP4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
DKK3Q9UBP4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
DKK3Q9UBP4 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AC073073.2-201ENST00000609827 2578 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.145-201ENST00000363527 102 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 SNORA14A-201ENST00000364773 135 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 SNORA22B-201ENST00000383876 138 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 RNU6-1040P-201ENST00000383974 107 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AC104332.2-201ENST00000429959 156 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 RN7SL807P-201ENST00000470923 297 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AC007536.1-201ENST00000533382 349 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 AC016925.2-201ENST00000605108 242 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 PISRT1.1-201ENST00000616930 107 ntBASIC3.44□□□□□ -1.86
DKK3Q9UBP4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DKK3Q9UBP4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC233263.6-201ENST00000631132 1963 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AL035425.3-201ENST00000564206 4996 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC138393.1-203ENST00000327086 343 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.31-201ENST00000362574 102 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.324-201ENST00000365165 102 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 SNORA75B-201ENST00000384053 137 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 RNU6-639P-201ENST00000384074 107 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 RNU2-33P-201ENST00000410344 192 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 RNA5SP38-201ENST00000410750 119 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 Z99755.1-201ENST00000414048 380 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC018865.2-201ENST00000423631 129 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AL590383.1-201ENST00000428602 75 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 NDUFB1P2-201ENST00000449477 176 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 RPL21P10-201ENST00000463521 490 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 RPL30P14-201ENST00000482744 348 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC011005.2-201ENST00000487324 359 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 RPL21P13-201ENST00000488305 481 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 RNU6-1213P-201ENST00000517075 94 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 MIR4738-201ENST00000579134 87 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC106900.2-201ENST00000604994 317 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC009229.3-201ENST00000608056 282 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC019193.3-201ENST00000609144 554 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AL161423.1-201ENST00000613700 262 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC090617.7-201ENST00000623952 126 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
DKK3Q9UBP4 AC008568.2-201ENST00000623862 2313 ntBASIC3.43□□□□□ -1.86
DKK3Q9UBP4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 AL359693.1-201ENST00000614959 2407 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.5-201ENST00000362334 102 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RNU6-1115P-201ENST00000362490 106 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 SNORA38.1-201ENST00000364172 131 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.245-201ENST00000364493 95 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 AC117470.1-201ENST00000381974 330 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RNU6-741P-201ENST00000383889 107 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RNU6-1179P-201ENST00000384667 107 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 SNORA75.6-201ENST00000391318 127 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.594-201ENST00000410373 140 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 HMGB1P9-201ENST00000429856 646 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 MYL8P-204ENST00000431574 518 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 GPM6BP2-201ENST00000432046 144 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms