Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC88CQ9P219 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 RNU6-858P-201ENST00000362436 107 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 RNU6-462P-201ENST00000362659 105 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 RNU6-1080P-201ENST00000383982 107 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 RNU6-1242P-201ENST00000391052 103 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 RNU4-22P-201ENST00000411058 166 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 SKA2P1-201ENST00000425592 390 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AL078601.1-201ENST00000444542 271 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 OR6C5P-201ENST00000452388 923 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 MTATP6P14-201ENST00000455189 673 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 BTF3P15-201ENST00000455606 336 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AC010631.1-201ENST00000474150 156 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 SNORA31.19-201ENST00000517079 126 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 RNA5SP490-201ENST00000517141 136 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 RNA5SP165-201ENST00000517142 115 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 MIR4509-3-201ENST00000578671 94 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 MIR4509-2-201ENST00000583920 94 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 BNIP3P9-201ENST00000603714 553 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AC069431.2-201ENST00000604149 1099 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AL022154.1-201ENST00000604698 785 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 MIR4509-1-201ENST00000618224 94 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 AC097655.1-201ENST00000635075 318 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 MTND5P33-201ENST00000571250 1450 ntBASIC1.09□□□□□ -2.24
CCDC88CQ9P219 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC88CQ9P219 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 RNY3P13-201ENST00000365542 102 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 RNU6-413P-201ENST00000384115 107 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AP000542.1-201ENST00000448473 371 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC108059.3-201ENST00000456388 214 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 RNU6-572P-201ENST00000516724 80 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AP005136.1-201ENST00000579765 429 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AF038458.1-201ENST00000588406 262 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AL158042.1-201ENST00000605338 460 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC096772.1-201ENST00000609146 564 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC006386.1-201ENST00000619436 415 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AL049777.1-201ENST00000622740 518 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC112204.3-201ENST00000623822 332 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 RNU6-942P-201ENST00000363002 107 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 FTH1P15-201ENST00000406984 280 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AL353777.1-201ENST00000425552 326 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AL627311.1-201ENST00000431514 115 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 FABP5P15-201ENST00000453566 214 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 SNORA44.1-201ENST00000517031 108 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 MTND3P19-201ENST00000603825 345 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 TUG1_2.1-201ENST00000614234 87 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AL109620.1-201ENST00000618738 1197 ntBASIC1.08□□□□□ -2.24
CCDC88CQ9P219 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC88CQ9P219 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 RNY4P24-201ENST00000362735 96 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 SNORD114-19-201ENST00000363072 75 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 Y_RNA.354-201ENST00000365448 111 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 RNU6-1200P-201ENST00000384162 107 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 RNU6-166P-201ENST00000384371 107 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 MIR19A-201ENST00000384878 82 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 SNORA40.6-201ENST00000391153 128 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AC244636.1-201ENST00000421152 228 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC88CQ9P219 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC88CQ9P219 USP9YP24-201ENST00000434374 697 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC88CQ9P219 RPL7P43-201ENST00000478876 753 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AC010587.2-201ENST00000511727 448 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 SNORA4.4-201ENST00000515921 135 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 DUXAP5-201ENST00000529668 529 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AL356432.3-201ENST00000568952 465 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC88CQ9P219 RNU4-5P-201ENST00000607255 135 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AL365204.3-201ENST00000612448 685 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC88CQ9P219 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AC007792.1-201ENST00000623023 402 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AC007490.1-201ENST00000624321 703 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 AL445984.1-201ENST00000637834 659 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms