Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 Y_RNA.111-201ENST00000363248 100 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 RNU6-960P-201ENST00000364056 120 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 Y_RNA.500-201ENST00000384466 111 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 RNU6-636P-201ENST00000384598 107 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 MIR10A-201ENST00000385043 110 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 AC068050.1-201ENST00000394891 380 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 SRIP3-201ENST00000413200 219 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 AC009310.1-201ENST00000414414 451 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 AL627311.1-201ENST00000431514 115 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 CALM1P1-201ENST00000442082 433 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 FDX1P2-201ENST00000450769 375 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 HMGN2P23-201ENST00000456759 269 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.42□□□□□ -2.18
VAPAQ9P0L0 AP001025.1-201ENST00000486139 332 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 AC117532.1-201ENST00000514638 323 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.42□□□□□ -2.18
VAPAQ9P0L0 EEF1A1P37-201ENST00000522748 715 ntBASIC1.42□□□□□ -2.18
VAPAQ9P0L0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.42□□□□□ -2.18
VAPAQ9P0L0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.42□□□□□ -2.18
VAPAQ9P0L0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VAPAQ9P0L0 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.41□□□□□ -2.18
VAPAQ9P0L0 snoU2_19.1-201ENST00000362361 80 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 CBX3P9-201ENST00000402326 552 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 RNU2-23P-201ENST00000410545 195 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 RN7SKP51-201ENST00000410781 304 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 RN7SKP284-201ENST00000411002 343 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AL031313.1-201ENST00000448435 256 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AC021146.2-201ENST00000504736 556 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AC112206.3-201ENST00000514578 389 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AC107934.1-201ENST00000522215 217 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AL354943.1-201ENST00000572103 781 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AC078795.2-201ENST00000602835 1252 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AL022154.1-201ENST00000604698 785 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AL158032.1-201ENST00000605401 106 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AL157392.4-201ENST00000609756 345 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AC091834.1-201ENST00000614543 472 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.41□□□□□ -2.18
VAPAQ9P0L0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.41□□□□□ -2.18
VAPAQ9P0L0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.41□□□□□ -2.18
VAPAQ9P0L0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VAPAQ9P0L0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VAPAQ9P0L0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.4□□□□□ -2.18
VAPAQ9P0L0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AL033519.2-201ENST00000403958 392 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AL355143.1-201ENST00000407101 841 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 RPS15AP12-201ENST00000419498 388 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AC092648.1-201ENST00000425870 423 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 USP9YP18-201ENST00000425912 695 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AL353752.1-201ENST00000454946 260 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 snoU109.3-201ENST00000459477 145 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 FO393415.2-201ENST00000480085 343 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 Y_RNA.675-201ENST00000516389 149 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 SNORA25.15-201ENST00000516487 89 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 RNU6-1003P-201ENST00000517099 105 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 RN7SKP256-201ENST00000517201 314 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 MIR3198-2-201ENST00000577868 80 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 MIR4513-201ENST00000581077 86 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 BNIP3P40-201ENST00000596017 556 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 DEFB131E-202ENST00000602581 683 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AL158050.2-201ENST00000605336 568 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AC121334.2-201ENST00000605387 271 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 AC144521.1-201ENST00000607148 956 ntBASIC1.4□□□□□ -2.19
VAPAQ9P0L0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.4□□□□□ -2.19
VAPAQ9P0L0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AL445523.1-201ENST00000451184 1362 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 MIR424-201ENST00000362227 98 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 SNORD14B-201ENST00000364533 90 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 MIR29B2-201ENST00000385055 81 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 MIR30A-201ENST00000385092 71 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AC074117.2-201ENST00000417130 397 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AL353777.1-201ENST00000425552 326 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AL357134.1-201ENST00000445848 426 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 FAM206BP-201ENST00000510179 541 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AC116347.2-201ENST00000514912 523 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 Y_RNA.687-201ENST00000516558 91 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 RNU6-295P-201ENST00000516901 104 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms