Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNU6-261P-201ENST00000459506 102 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 RPL23AP45-201ENST00000476406 468 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 TRBV1-201ENST00000476502 284 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 AL049873.1-201ENST00000480540 376 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 MTND3P25-201ENST00000509243 135 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 AC104136.1-201ENST00000512969 394 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 RNU1-86P-201ENST00000516108 154 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 SCARNA17.1-201ENST00000516211 143 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 SCARNA17.2-201ENST00000516334 143 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 RNU1-107P-201ENST00000516617 154 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 AL137161.1-201ENST00000532231 390 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.5□□□□□ -2.01
HACD3Q9P035 AL512310.1-201ENST00000548639 172 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 AC006199.1-201ENST00000548728 219 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 AC025678.1-201ENST00000567861 338 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
HACD3Q9P035 NRBF2P5-201ENST00000603087 788 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 AC122108.2-201ENST00000611946 526 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HACD3Q9P035 SCARNA17.4-201ENST00000614296 143 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 MIR6817-201ENST00000615588 66 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 U6.42-201ENST00000618440 107 ntBASIC2.5□□□□□ -2.01
HACD3Q9P035 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HACD3Q9P035 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HACD3Q9P035 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
HACD3Q9P035 ADAM3A-203ENST00000461344 2157 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HACD3Q9P035 SNORD14B-201ENST00000364533 90 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 RNU6-898P-201ENST00000365627 104 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 RNU6-45P-201ENST00000384471 107 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 RNU6-1072P-201ENST00000384703 107 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 RNU6-443P-201ENST00000384780 107 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 RNU6-750P-201ENST00000390946 107 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HACD3Q9P035 AL162578.1-201ENST00000406202 378 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 AL590002.1-201ENST00000406554 418 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.49□□□□□ -2.01
HACD3Q9P035 RPS3P1-201ENST00000456781 192 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 SCARNA18-201ENST00000459004 134 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.49□□□□□ -2.01
HACD3Q9P035 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.49□□□□□ -2.01
HACD3Q9P035 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.49□□□□□ -2.01
HACD3Q9P035 COX6CP5-201ENST00000527162 228 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.49□□□□□ -2.01
HACD3Q9P035 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.49□□□□□ -2.01
HACD3Q9P035 ZNF519P2-201ENST00000557032 169 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.49□□□□□ -2.01
HACD3Q9P035 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.49□□□□□ -2.01
HACD3Q9P035 MIR3117-201ENST00000584034 78 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 MIR4424-201ENST00000585257 86 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 AC005261.5-201ENST00000596280 355 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 AL645944.1-201ENST00000603857 493 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 U4.5-201ENST00000617137 123 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 MIR3199-2-201ENST00000636243 86 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 MIR7515-201ENST00000637837 67 ntBASIC2.49□□□□□ -2.01
HACD3Q9P035 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HACD3Q9P035 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HACD3Q9P035 CDC27P3-201ENST00000635418 1910 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HACD3Q9P035 Y_RNA.6-201ENST00000362350 114 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HACD3Q9P035 SNORA41-201ENST00000384675 132 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 SNORA16.2-201ENST00000390991 127 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 SNORD70.1-201ENST00000391007 85 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 RPS4XP7-201ENST00000406274 780 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 RNU2-3P-201ENST00000410144 191 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 RNU6-648P-201ENST00000410190 107 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 Y_RNA.599-201ENST00000410489 109 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 CYCSP33-201ENST00000414485 327 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 AC016831.2-201ENST00000417179 352 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 USP9YP27-201ENST00000418455 438 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.48□□□□□ -2.01
HACD3Q9P035 AL627311.1-201ENST00000431514 115 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.48□□□□□ -2.01
HACD3Q9P035 AL445687.1-201ENST00000439946 251 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 RNA5SP401-201ENST00000515920 127 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 RNU2-69P-201ENST00000516061 100 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 RNU6-581P-201ENST00000516214 105 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 IGLV3-17-201ENST00000519099 244 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.48□□□□□ -2.01
HACD3Q9P035 OR5AQ1P-201ENST00000527596 927 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.48□□□□□ -2.01
HACD3Q9P035 PRELID2P1-201ENST00000552837 301 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 AC027807.1-201ENST00000559921 996 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
HACD3Q9P035 AC234778.2-201ENST00000566241 354 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 AC092325.1-201ENST00000566449 554 ntBASIC2.48□□□□□ -2.01
HACD3Q9P035 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms