Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 Z82210.1-201ENST00000440037 231 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 RPS29P12-201ENST00000460178 152 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 RPS27AP9-201ENST00000477681 438 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 TRBVA-201ENST00000498804 316 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 FGF7P4-201ENST00000509595 295 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-277P-201ENST00000516272 106 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.682-201ENST00000516457 100 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-256P-201ENST00000516747 97 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AP000889.2-201ENST00000532684 490 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AC022080.3-201ENST00000544433 482 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 MIR3941-201ENST00000582572 103 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 MIR3605-201ENST00000583214 100 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 MIR5692C1-201ENST00000585309 91 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AP000787.2-201ENST00000604432 568 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AC004805.2-201ENST00000605382 482 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 uc_338.15-201ENST00000615470 191 ntBASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMARCAL1Q9NZC9 MIR491-201ENST00000384877 84 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 FAT1P1-201ENST00000406588 507 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AL512844.2-201ENST00000433990 593 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AL513043.1-201ENST00000439124 535 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 RPS29P26-201ENST00000477483 171 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 RPL30P14-201ENST00000482744 348 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 RNU1-86P-201ENST00000516108 154 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-1069P-201ENST00000516612 133 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 RNU1-107P-201ENST00000516617 154 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AC009902.1-201ENST00000519351 183 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AC025755.1-201ENST00000521306 278 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 GLYCAM1-201ENST00000546596 285 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AL355375.2-201ENST00000574825 175 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 MTCO3P13-201ENST00000577757 781 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 MIR4325-201ENST00000583049 90 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 FAM157A-202ENST00000615155 405 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AL031601.2-202ENST00000622650 282 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 MIR1302-1-201ENST00000637932 143 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 AC006026.1-201ENST00000444025 1803 ntBASIC2.89□□□□□ -1.95
SMARCAL1Q9NZC9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC091564.4-201ENST00000533934 2194 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AL049641.1-201ENST00000441055 1948 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC090740.1-201ENST00000623193 2262 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC138393.1-203ENST00000327086 343 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 FTLP6-201ENST00000355274 422 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-266P-201ENST00000364225 107 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.813-201ENST00000364639 102 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-1013P-201ENST00000384180 107 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.474-201ENST00000384341 102 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-140P-201ENST00000384566 108 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA48.5-201ENST00000391143 135 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA26.7-201ENST00000391288 122 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 CYCSP33-201ENST00000414485 327 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 VN1R36P-201ENST00000414936 291 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC092047.1-201ENST00000424997 240 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AL590664.1-201ENST00000448065 339 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 RPL12P25-201ENST00000455592 494 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 RPL30P5-201ENST00000494923 336 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC008716.1-201ENST00000511084 513 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.691-201ENST00000516611 103 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA25.17-201ENST00000517184 124 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-323P-201ENST00000521915 107 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AL161756.2-201ENST00000604597 246 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 AC135507.2-201ENST00000612443 309 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms