Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AL627311.1-201ENST00000431514 115 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AL139415.2-201ENST00000431968 163 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AL161651.1-201ENST00000440882 223 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AC011005.2-201ENST00000487324 359 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 HMGB1P30-201ENST00000492455 606 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AC074344.1-201ENST00000512823 224 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 MTND1P5-201ENST00000517906 940 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AL138976.2-201ENST00000563989 694 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AP000907.4-201ENST00000604143 237 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 RMST_3.1-201ENST00000611651 109 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AC007014.2-201ENST00000615581 479 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 U6atac.1-201ENST00000616025 117 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
SPHK1Q9NYA1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 RNY3P3-201ENST00000363816 102 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 RNU2-3P-201ENST00000410144 191 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 NUP35P1-201ENST00000422734 947 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AL109933.2-201ENST00000452651 260 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 SNORA59A-201ENST00000459326 152 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 MTAPP1-201ENST00000489154 819 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 LRRC34P2-201ENST00000514850 553 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AP000889.1-201ENST00000530968 660 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AC005498.1-201ENST00000592125 465 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AP003465.2-201ENST00000602571 373 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AC092747.3-201ENST00000603769 301 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 U2.17-201ENST00000611454 95 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 DISC2.1-201ENST00000612827 205 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 MIR6134-201ENST00000617606 109 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AC024614.3-201ENST00000637860 256 ntBASIC2.59□□□□□ -1.99
SPHK1Q9NYA1 AC010889.1-201ENST00000566193 2666 ntBASIC2.59□□□□□ -2
SPHK1Q9NYA1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.59□□□□□ -2
SPHK1Q9NYA1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.59□□□□□ -2
SPHK1Q9NYA1 AC004520.1-201ENST00000608362 1413 ntBASIC2.59□□□□□ -2
SPHK1Q9NYA1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.59□□□□□ -2
SPHK1Q9NYA1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
SPHK1Q9NYA1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SPHK1Q9NYA1 RNU6-858P-201ENST00000362436 107 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 RNU6-877P-201ENST00000383868 107 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 MIR34A-201ENST00000385130 110 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 RNU6-750P-201ENST00000390946 107 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 AL512633.1-201ENST00000399931 655 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 RNA5SP184-201ENST00000411071 108 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 RNU6-607P-201ENST00000411283 108 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.58□□□□□ -2
SPHK1Q9NYA1 AC063976.3-201ENST00000426849 329 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 MTATP6P13-201ENST00000438531 667 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 NFU1P2-201ENST00000448700 469 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 AC087884.1-201ENST00000469738 328 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.58□□□□□ -2
SPHK1Q9NYA1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 AC116655.1-201ENST00000508324 901 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.58□□□□□ -2
SPHK1Q9NYA1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 CENPUP1-201ENST00000526649 1202 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 AC010378.1-201ENST00000619270 362 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 MIR6852-201ENST00000621699 66 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 MIR3662-201ENST00000637030 95 ntBASIC2.58□□□□□ -2
SPHK1Q9NYA1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
SPHK1Q9NYA1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.58□□□□□ -2
SPHK1Q9NYA1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SPHK1Q9NYA1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SPHK1Q9NYA1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.57□□□□□ -2
SPHK1Q9NYA1 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 RNU6-266P-201ENST00000364225 107 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 RNU1-100P-201ENST00000365255 165 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 RNU6-72P-201ENST00000384285 79 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 MIR514A2-201ENST00000385131 88 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 MIR514A3-201ENST00000385132 88 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.57□□□□□ -2
SPHK1Q9NYA1 AL133475.1-201ENST00000404414 305 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 AL590004.2-201ENST00000404787 371 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 MIR1277-201ENST00000408536 78 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 Y_RNA.615-201ENST00000410769 117 ntBASIC2.57□□□□□ -2
SPHK1Q9NYA1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms