Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MTND3P9-201ENST00000429526 346 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 NUTF2P7-201ENST00000453086 375 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 RPS29P27-201ENST00000463711 170 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 RN7SL442P-201ENST00000473804 320 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 RPS27P26-201ENST00000494583 239 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 RNU6-1170P-201ENST00000515974 106 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AC109446.1-201ENST00000566172 220 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AC080078.3-201ENST00000605407 463 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 MIR8076-201ENST00000611401 83 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 MIR6810-201ENST00000622701 70 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AC241585.2-209ENST00000638217 143 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 MTND5P27-201ENST00000428871 1720 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AL356274.2-201ENST00000624379 3752 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 Y_RNA.2-201ENST00000362330 96 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 RNU6-227P-201ENST00000362865 103 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 RNU1-13P-201ENST00000384499 162 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 RNU6-748P-201ENST00000384648 107 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 RNU6-1011P-201ENST00000384668 107 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 RNA5SP354-201ENST00000391247 136 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 RSL24D1P6-201ENST00000426934 401 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC243964.1-201ENST00000441814 261 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC007969.2-201ENST00000441891 191 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC007677.1-201ENST00000445757 515 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 RPL21P23-201ENST00000446654 460 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC012308.1-201ENST00000451232 178 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC103987.1-201ENST00000473394 348 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC027575.1-201ENST00000481064 460 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC093303.1-201ENST00000514549 295 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 RNU6-1153P-201ENST00000516760 105 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC107934.2-201ENST00000518653 310 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC093249.1-201ENST00000567049 203 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 MIR4697-201ENST00000582977 78 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC078795.3-201ENST00000602913 472 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AL391813.1-201ENST00000603098 260 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AP001836.1-201ENST00000604675 523 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC019159.1-201ENST00000605094 187 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC024581.2-201ENST00000619986 252 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 AC091564.4-201ENST00000533934 2194 ntBASIC3.49□□□□□ -1.85
MKS1Q9NXB0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC007823.1-201ENST00000569932 1566 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 Y_RNA.146-201ENST00000363549 102 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 U3.6-201ENST00000363622 211 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 SNORA73.2-201ENST00000364946 201 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 RNU6-487P-201ENST00000365430 104 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AP000275.1-201ENST00000411943 390 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 USMG5P1-201ENST00000425964 177 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AL117339.2-201ENST00000430475 180 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 HMGN1P18-201ENST00000457642 277 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 RPL23AP67-201ENST00000465341 474 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC107626.1-201ENST00000471084 183 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AP001025.1-201ENST00000486139 332 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC097462.2-201ENST00000504623 481 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 MTCO3P13-201ENST00000577757 781 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 MTND5P10-201ENST00000603719 1809 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 AC032011.1-201ENST00000611703 1549 ntBASIC3.48□□□□□ -1.85
MKS1Q9NXB0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
MKS1Q9NXB0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 CD24P4-201ENST00000382840 243 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 RNU6-692P-201ENST00000384496 107 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 RNU6-331P-201ENST00000384724 107 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 SNORA75.6-201ENST00000391318 127 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AL354751.2-201ENST00000415471 210 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC009414.1-201ENST00000427200 443 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AL358232.1-201ENST00000448030 501 ntBASIC3.47□□□□□ -1.85
MKS1Q9NXB0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.47□□□□□ -1.85
MKS1Q9NXB0 RNU5B-3P-201ENST00000516601 115 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms