Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AL669831.1-202ENST00000428504 417 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC002486.1-201ENST00000435098 391 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 GTF2IP13-201ENST00000438487 386 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 SNRPFP3-201ENST00000457792 225 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 snoU109.2-201ENST00000459316 135 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC090515.1-201ENST00000465295 476 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC009812.2-201ENST00000517657 457 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC025678.1-201ENST00000567861 338 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC090897.2-201ENST00000581715 130 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 MIR4325-201ENST00000583049 90 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AL160281.1-201ENST00000605307 311 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 NDUFA8P1-201ENST00000605525 367 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 KPNA2P1-201ENST00000458289 1591 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC002543.1-201ENST00000299783 1954 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 RNU6-525P-201ENST00000363685 104 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 Y_RNA.399-201ENST00000383955 105 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 MIR95-201ENST00000385072 81 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 BTF3P7-201ENST00000407097 488 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 RNU2-9P-201ENST00000410194 145 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 CYCSP33-201ENST00000414485 327 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AC006512.1-201ENST00000468816 291 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 CKS1BP2-201ENST00000497342 240 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AC083906.5-201ENST00000503722 328 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 RNU6-405P-201ENST00000516637 110 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 RN7SKP219-201ENST00000516825 296 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AL137161.1-201ENST00000532231 390 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AL138963.2-201ENST00000605137 226 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AC093788.1-201ENST00000609356 927 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 MIR8057-201ENST00000620957 69 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AC007792.1-201ENST00000623023 402 ntBASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
CHCHD3Q9NX63 Y_RNA.1-201ENST00000352915 104 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 MIR422A-201ENST00000362286 90 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 RNU6-78P-201ENST00000362897 107 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 RNA5SP125-201ENST00000364843 120 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 U8.8-201ENST00000365399 135 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 RNU6-1127P-201ENST00000384580 107 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AL445529.1-201ENST00000398713 389 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 DEFB108C-201ENST00000400154 252 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 RNU2-23P-201ENST00000410545 195 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AL356379.1-201ENST00000414105 126 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC074117.2-201ENST00000417130 397 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 PGBD4P6-201ENST00000421501 610 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 NUP35P1-201ENST00000422734 947 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 HMGB1P31-201ENST00000437242 427 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 snoU13.14-201ENST00000459372 104 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC008885.1-201ENST00000514930 301 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 SNORA48.11-201ENST00000517015 89 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 SNORA31.23-201ENST00000517219 133 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 RN7SKP57-201ENST00000517248 293 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC069113.1-201ENST00000517763 267 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC024909.2-201ENST00000553035 286 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC087683.1-201ENST00000591187 441 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AC093732.2-201ENST00000607950 274 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 Z82243.1-201ENST00000609432 473 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 AL442067.2-201ENST00000614033 363 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 uc_338.15-201ENST00000615470 191 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 MIR7112-201ENST00000616126 65 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 MIR3651-201ENST00000630427 90 ntBASIC2.45□□□□□ -2.02
CHCHD3Q9NX63 Y_RNA.51-201ENST00000362725 102 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 RNU6-552P-201ENST00000362869 119 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 Y_RNA.324-201ENST00000365165 102 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 SNORA54-201ENST00000384281 123 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 Y_RNA.481-201ENST00000384373 102 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 MIR17-201ENST00000385012 84 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 AC096664.2-201ENST00000411843 406 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 HMGB3P2-201ENST00000411913 584 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 MTCO2P19-201ENST00000427513 598 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 AL161788.1-201ENST00000441805 169 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 PRPS1P1-201ENST00000445305 876 ntBASIC2.44□□□□□ -2.02
CHCHD3Q9NX63 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms