Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 SNORA41-201ENST00000384675 132 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 MIR591-201ENST00000385290 95 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AC096649.2-201ENST00000416186 393 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 MTND3P9-201ENST00000429526 346 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 RNA5SP384-201ENST00000516615 116 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 ACA59.2-201ENST00000517061 156 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AC026403.1-201ENST00000518938 295 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 SNRPGP18-201ENST00000553000 214 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 TGIF1P1-201ENST00000558095 802 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 MIR8058-201ENST00000615737 89 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AC024581.2-201ENST00000619986 252 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 AC073346.2-201ENST00000624724 2058 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 Y_RNA.326-201ENST00000365176 113 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 RNU6-331P-201ENST00000384724 107 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 MIR30B-201ENST00000384850 88 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 RN7SKP156-201ENST00000410308 342 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AP000275.1-201ENST00000411943 390 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 EIF4EP2-201ENST00000422816 654 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 PTGES3P4-201ENST00000426243 356 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 TBCAP1-201ENST00000436520 327 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AC011816.1-201ENST00000441346 546 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 RN7SL330P-201ENST00000469709 307 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AC090096.1-201ENST00000489168 390 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 RNU6-264P-201ENST00000517134 104 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 MTCO3P13-201ENST00000577757 781 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 MIR3171-201ENST00000584270 74 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 SNRPGP17-201ENST00000603780 214 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AC019159.1-201ENST00000605094 187 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AC090617.7-201ENST00000623952 126 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 AC091152.2-201ENST00000591628 2569 ntBASIC3.52□□□□□ -1.85
CCM2LQ9NUG4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 Y_RNA.112-201ENST00000363250 102 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 RNU6-474P-201ENST00000384243 107 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 MIR559-201ENST00000385188 96 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 MIR634-201ENST00000385208 97 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 RNU2-49P-201ENST00000410666 184 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 RNU6-55P-201ENST00000411092 107 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AC023141.4-201ENST00000412031 328 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 RPL21P23-201ENST00000446654 460 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 SNORA59A-201ENST00000459326 152 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AC107626.1-201ENST00000471084 183 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 RNU1-95P-201ENST00000516357 160 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 RNU1-128P-201ENST00000516704 160 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 SNORD59.2-201ENST00000516873 68 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 MIR4298-201ENST00000584380 73 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 AC097372.5-201ENST00000623665 376 ntBASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCM2LQ9NUG4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms