Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MIR95-201ENST00000385072 81 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 AC074117.2-201ENST00000417130 397 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 AC008267.5-201ENST00000424928 265 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 MTCO1P19-201ENST00000443487 500 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 IFNA11P-201ENST00000446352 526 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 CYP2C59P-201ENST00000457790 269 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 AC068781.1-201ENST00000488231 618 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 MTCO3P9-201ENST00000506989 781 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 RNA5SP148-201ENST00000516527 94 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 RNU6-1178P-201ENST00000516674 107 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 SUB1P2-201ENST00000556401 297 ntBASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZCCHC3Q9NUD5 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 RNA5SP240-201ENST00000365355 128 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 MIR186-201ENST00000384988 86 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 OR9R1P-201ENST00000412200 877 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AF274854.1-201ENST00000413236 615 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 HMGB1P31-201ENST00000437242 427 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC016691.1-201ENST00000441321 413 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AL513328.1-201ENST00000446460 224 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 MTND1P18-201ENST00000448191 573 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AL118520.1-201ENST00000450770 291 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 RPS3P1-201ENST00000456781 192 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC010424.1-201ENST00000506336 297 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC092436.1-201ENST00000506450 503 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 MTND2P38-201ENST00000522536 667 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC025449.1-201ENST00000603896 529 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AL355297.2-201ENST00000604792 129 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC091834.1-201ENST00000614543 472 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 AC136475.10-201ENST00000620253 385 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ZCCHC3Q9NUD5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 MIR21-201ENST00000362134 72 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 RNU6-78P-201ENST00000362897 107 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 RNU6-1120P-201ENST00000362988 108 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 Y_RNA.159-201ENST00000363674 87 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 SNORA3A-201ENST00000364113 130 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 RNA5SP390-201ENST00000410191 113 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 MTATP6P18-201ENST00000417994 673 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AL161788.1-201ENST00000441805 169 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AC124916.1-201ENST00000444020 547 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 RPL31P3-201ENST00000458430 332 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 GMFBP1-201ENST00000467831 427 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 CKS1BP2-201ENST00000497342 240 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 LRRC34P2-201ENST00000514850 553 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AC105137.2-201ENST00000569073 466 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 RPL30P11-203ENST00000598995 310 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 NDUFA8P1-201ENST00000605525 367 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 uc_338.15-201ENST00000615470 191 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AL031601.2-202ENST00000622650 282 ntBASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.23□□□□□ -2.05
ZCCHC3Q9NUD5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 ZNF680P1-201ENST00000436625 1469 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 NDUFB4P4-201ENST00000404822 243 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 RNU2-9P-201ENST00000410194 145 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 MTCO2P34-201ENST00000421994 607 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 MTCO2P16-201ENST00000436962 677 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AL356010.1-201ENST00000456364 102 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC006512.1-201ENST00000468816 291 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 MTCYBP40-201ENST00000509390 1135 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC117532.1-201ENST00000514638 323 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC105417.1-201ENST00000514691 285 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 RNU4-29P-201ENST00000515943 174 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 RNU2-53P-201ENST00000516257 147 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 IGLV3-17-201ENST00000519099 244 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms