Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MRPL42P6-201ENST00000486397 371 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 SNORA43.2-201ENST00000516652 128 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 Y_RNA.702-201ENST00000516843 96 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 ACA59.2-201ENST00000517061 156 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC026464.5-201ENST00000562497 722 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC005498.1-201ENST00000592125 465 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC024153.1-201ENST00000603103 365 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC091152.3-201ENST00000604227 325 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AP000787.2-201ENST00000604432 568 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC002064.3-201ENST00000623448 346 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AL008636.1-201ENST00000625038 1018 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 MIR3651-201ENST00000630427 90 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC004944.1-201ENST00000517807 3059 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC073325.2-201ENST00000339545 159 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 Y_RNA.166-201ENST00000363730 102 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 Y_RNA.301-201ENST00000364990 103 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 DYNLT3P1-201ENST00000378574 347 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RNU6-128P-201ENST00000383976 107 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RNU6-214P-201ENST00000384130 107 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 SAR1AP2-201ENST00000392696 594 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RN7SKP58-201ENST00000411010 305 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RPL23AP83-201ENST00000434984 473 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 USP9YP8-201ENST00000441913 500 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RPL32P28-201ENST00000443577 397 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 PPP1R2P5-201ENST00000457256 603 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC006026.2-201ENST00000457376 180 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC091179.1-201ENST00000461606 579 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RN7SL863P-201ENST00000462370 296 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RN7SL504P-201ENST00000494496 287 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC091951.2-201ENST00000500762 203 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RNU7-30P-201ENST00000516835 62 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 RNU6-273P-201ENST00000516937 96 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC109479.2-201ENST00000517842 174 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC007151.1-201ENST00000572774 483 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC100830.2-201ENST00000581636 240 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AL355877.2-201ENST00000603670 358 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AL161756.2-201ENST00000604597 246 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 YPEL5P2-201ENST00000605553 359 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AL138726.1-201ENST00000614873 333 ntBASIC2.75□□□□□ -1.97
HINT3Q9NQE9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HINT3Q9NQE9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 RNU6-858P-201ENST00000362436 107 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 Y_RNA.135-201ENST00000363439 95 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 SNORD81.2-201ENST00000365153 76 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 RNU6-1329P-201ENST00000365664 107 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 MIR491-201ENST00000384877 84 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 SNORD67-201ENST00000390833 111 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 Y_RNA.604-201ENST00000410574 102 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 BMS1P22-201ENST00000414726 313 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 PTGES3P4-201ENST00000426243 356 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AL031274.1-201ENST00000450334 232 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AC092436.3-201ENST00000511788 257 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 RNU6-1088P-201ENST00000516850 104 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 RN7SKP57-201ENST00000517248 293 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 COPS8P3-201ENST00000526024 482 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 MIR5004-201ENST00000579078 107 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AC023043.2-201ENST00000589678 1026 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AL391813.1-201ENST00000603098 260 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AL133393.1-201ENST00000603277 287 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AL022345.1-201ENST00000607292 135 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 AL133216.2-202ENST00000634512 349 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 U4.7-201ENST00000638126 106 ntBASIC2.74□□□□□ -1.97
HINT3Q9NQE9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.74□□□□□ -1.97
HINT3Q9NQE9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
HINT3Q9NQE9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HINT3Q9NQE9 Y_RNA.212-201ENST00000364177 102 ntBASIC2.73□□□□□ -1.97
HINT3Q9NQE9 RNU6-19P-201ENST00000384718 107 ntBASIC2.73□□□□□ -1.97
HINT3Q9NQE9 AL117339.3-201ENST00000418733 162 ntBASIC2.73□□□□□ -1.97
HINT3Q9NQE9 RPL7P37-201ENST00000425095 738 ntBASIC2.73□□□□□ -1.97
HINT3Q9NQE9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms