Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 BPY2DP-201ENST00000422208 265 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.73□□□□□ -1.81
VTA1Q9NP79 AL714022.1-201ENST00000439897 151 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 PCMTD1P1-201ENST00000455560 355 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.73□□□□□ -1.81
VTA1Q9NP79 RPL23AP62-201ENST00000463396 453 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC006445.1-201ENST00000491925 405 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 Y_RNA.687-201ENST00000516558 91 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 HPRT1P3-201ENST00000539521 576 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC018462.2-201ENST00000605375 395 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC123912.5-201ENST00000605470 343 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC019193.3-201ENST00000609144 554 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AL157817.1-201ENST00000614264 790 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AL162274.2-201ENST00000614406 332 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC244517.12-201ENST00000623581 663 ntBASIC3.73□□□□□ -1.81
VTA1Q9NP79 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VTA1Q9NP79 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VTA1Q9NP79 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VTA1Q9NP79 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.72□□□□□ -1.81
VTA1Q9NP79 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VTA1Q9NP79 Y_RNA.187-201ENST00000363918 113 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VTA1Q9NP79 RNU4-14P-201ENST00000410858 122 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AL117339.3-201ENST00000418733 162 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AF228730.4-201ENST00000421457 183 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AL590632.1-201ENST00000424289 371 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.72□□□□□ -1.81
VTA1Q9NP79 HMGN2P10-201ENST00000448085 265 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 NIPA2P5-201ENST00000452282 464 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 ELOCP24-201ENST00000456370 334 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.72□□□□□ -1.81
VTA1Q9NP79 snoU13.28-201ENST00000459235 104 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 SMURF2P1-201ENST00000514992 481 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 RNA5SP341-201ENST00000516261 117 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 APOOP3-201ENST00000536787 586 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VTA1Q9NP79 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.72□□□□□ -1.81
VTA1Q9NP79 AC005899.2-201ENST00000584353 90 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.72□□□□□ -1.81
VTA1Q9NP79 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.72□□□□□ -1.81
VTA1Q9NP79 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.72□□□□□ -1.81
VTA1Q9NP79 AC009314.1-201ENST00000603871 304 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AC064836.2-201ENST00000609491 462 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AL359757.2-201ENST00000624309 274 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AC017071.1-201ENST00000564407 2204 ntBASIC3.72□□□□□ -1.81
VTA1Q9NP79 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.72□□□□□ -1.81
VTA1Q9NP79 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VTA1Q9NP79 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.81
VTA1Q9NP79 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VTA1Q9NP79 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 RNU6-1227P-201ENST00000383981 107 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 SNORD73A-201ENST00000386062 65 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 AC245291.1-201ENST00000419501 328 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 AC093151.1-201ENST00000427711 313 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 AL353705.1-201ENST00000433468 480 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 AC125238.1-201ENST00000448842 249 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 AC010099.1-201ENST00000455434 375 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 RN7SL863P-201ENST00000462370 296 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 AL049873.1-201ENST00000480540 376 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VTA1Q9NP79 AC104576.1-201ENST00000524225 88 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 AL163153.1-201ENST00000554223 283 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 CPDP1-201ENST00000579660 283 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 AL121917.1-203ENST00000605534 577 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 MIR3199-2-201ENST00000636243 86 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VTA1Q9NP79 MTND5P10-201ENST00000603719 1809 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 ZNF826P-207ENST00000622273 1910 ntBASIC3.71□□□□□ -1.82
VTA1Q9NP79 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VTA1Q9NP79 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.71□□□□□ -1.82
VTA1Q9NP79 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VTA1Q9NP79 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
VTA1Q9NP79 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VTA1Q9NP79 Y_RNA.146-201ENST00000363549 102 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 RNU6-198P-201ENST00000384258 104 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 SNORD116-29-201ENST00000384516 83 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 RPS29P13-201ENST00000402041 169 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 RNU6-1050P-201ENST00000410388 107 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AC126124.2-201ENST00000413542 321 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AC005534.2-201ENST00000431047 433 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AL031274.1-201ENST00000450334 232 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.7□□□□□ -1.82
VTA1Q9NP79 AP001486.1-201ENST00000463339 476 ntBASIC3.7□□□□□ -1.82
VTA1Q9NP79 AC026782.1-201ENST00000512952 449 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 687.5 ms