Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC244505.7-201ENST00000599675 272 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 BX284668.6-201ENST00000606899 438 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC240442.1-201ENST00000616055 283 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC097372.5-201ENST00000623665 376 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC112484.5-201ENST00000624189 228 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC007390.2-201ENST00000606229 3803 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 SNORD81.1-201ENST00000363064 77 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 SNORD113-8-201ENST00000363497 74 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-335P-201ENST00000364563 113 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-926P-201ENST00000384075 107 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 RNY3P4-201ENST00000384428 101 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-102P-201ENST00000384485 104 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AC092017.2-201ENST00000427600 362 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AC104332.1-201ENST00000440471 797 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AL132838.2-201ENST00000492041 314 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 RPL31P61-201ENST00000496160 376 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 HMGB1P22-201ENST00000505315 124 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AC026726.1-201ENST00000512859 601 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 MRPS36P4-201ENST00000534436 298 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 TOMM20P2-201ENST00000540082 421 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 MIR4659A-201ENST00000580269 81 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 RNA5SP108-201ENST00000605921 117 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AP002826.1-201ENST00000608835 315 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 MIR6868-201ENST00000611215 58 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 U6.99-201ENST00000637524 83 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 U4.7-201ENST00000638126 106 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SEC61A2Q9H9S3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-78P-201ENST00000362897 107 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 RNY1-201ENST00000364228 113 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-886P-201ENST00000384319 105 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 MIR1298-201ENST00000408783 112 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 RNU2-68P-201ENST00000410878 191 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 Y_RNA.793-201ENST00000411222 111 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 AL139156.1-201ENST00000412785 841 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 AL356867.1-201ENST00000429623 299 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 AL138752.1-201ENST00000452964 351 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 snoU13.24-201ENST00000458998 104 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 SERF1AP1-201ENST00000514575 187 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 SNORA31.18-201ENST00000517043 134 ntBASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.53□□□□□ -1.84
SEC61A2Q9H9S3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SEC61A2Q9H9S3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 AC233981.2-201ENST00000611524 1614 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 AC009541.1-201ENST00000438279 2662 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 SNORD58.1-201ENST00000391313 66 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 AL691449.1-201ENST00000426570 421 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 BX679664.1-201ENST00000434429 253 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 MED28P2-201ENST00000475771 317 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 MIR2116-201ENST00000517221 80 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.52□□□□□ -1.85
SEC61A2Q9H9S3 AC090617.3-201ENST00000573670 475 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms