Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 NACAP3-201ENST00000552100 481 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 H3F3AP1-201ENST00000559984 334 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AC074050.1-201ENST00000563247 211 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 MIR4643-201ENST00000577473 78 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 MIR3133-201ENST00000583157 78 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AC010928.2-201ENST00000588017 287 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 SNORD113-5-201ENST00000607261 78 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AL021997.2-201ENST00000615674 271 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 MIR6134-201ENST00000617606 109 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM56Q9BRZ2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM56Q9BRZ2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM56Q9BRZ2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.34□□□□□ -1.72
TRIM56Q9BRZ2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-326P-201ENST00000365480 107 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-1286P-201ENST00000383871 107 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 Y_RNA.504-201ENST00000384481 104 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 UBA52P6-201ENST00000399822 382 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-1245P-201ENST00000411130 106 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 HSPE1P12-201ENST00000412576 301 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 MTATP6P29-201ENST00000415057 132 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 AC017079.2-201ENST00000416102 485 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 RPS15AP7-201ENST00000439294 405 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 AC098831.1-201ENST00000440661 216 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 AL451050.1-201ENST00000450126 415 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 RPL7P49-201ENST00000471402 708 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 TRAV8-5-201ENST00000537369 341 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 AL133243.3-201ENST00000617415 3004 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 Z82217.1-201ENST00000625157 8149 ntBASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM56Q9BRZ2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 AL353743.1-202ENST00000431724 1695 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-879P-201ENST00000364328 108 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 RNA5SP515-201ENST00000364570 118 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 RNU1-139P-201ENST00000391307 165 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 PARP4P3-201ENST00000510265 317 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-1114P-201ENST00000516022 107 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 RNU2-31P-201ENST00000516954 155 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 MRPS36P4-201ENST00000534436 298 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 AC011602.1-201ENST00000546484 331 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 LINC00901.1-201ENST00000617252 152 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 AC241585.2-209ENST00000638217 143 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 ZNF826P-207ENST00000622273 1910 ntBASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM56Q9BRZ2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-942P-201ENST00000363002 107 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNA5SP447-201ENST00000363749 119 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNA5SP479-201ENST00000364858 117 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-926P-201ENST00000384075 107 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-187P-201ENST00000384139 106 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-1035P-201ENST00000384477 107 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 MIR32-201ENST00000384965 70 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 U3.22-201ENST00000391120 215 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 MTCO2P33-201ENST00000402100 465 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNU5A-5P-201ENST00000411054 116 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNA5SP39-201ENST00000411245 120 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 EIF1P2-201ENST00000428233 350 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AC005002.2-201ENST00000438228 269 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 CYCSP32-201ENST00000440548 321 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RPL23AP14-201ENST00000468281 468 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AC025554.1-201ENST00000505641 188 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AC107393.1-201ENST00000512403 346 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 RNU6-255P-201ENST00000516957 105 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AC006064.5-201ENST00000541782 248 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AC010620.2-201ENST00000600135 313 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AL162424.1-201ENST00000602325 221 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AL590392.1-201ENST00000604960 446 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 MIR432-201ENST00000606207 94 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AL110115.1-201ENST00000614396 364 ntBASIC4.31□□□□□ -1.72
TRIM56Q9BRZ2 AC024581.2-201ENST00000619986 252 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms