Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.01□□□□□ -2.09
NPAS2Q99743 TOMM20P4-201ENST00000427861 435 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AL627311.1-201ENST00000431514 115 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.01□□□□□ -2.09
NPAS2Q99743 GPM6BP3-201ENST00000442797 145 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.01□□□□□ -2.09
NPAS2Q99743 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NPAS2Q99743 AC098826.2-201ENST00000452011 651 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.01□□□□□ -2.09
NPAS2Q99743 Y_RNA.638-201ENST00000459374 113 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AC107032.1-201ENST00000485945 480 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.01□□□□□ -2.09
NPAS2Q99743 SCARNA16.3-201ENST00000516595 184 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.01□□□□□ -2.09
NPAS2Q99743 AC109329.1-201ENST00000518744 317 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.01□□□□□ -2.09
NPAS2Q99743 OR5B19P-201ENST00000531766 928 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.01□□□□□ -2.09
NPAS2Q99743 AC012414.6-201ENST00000568241 401 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.01□□□□□ -2.09
NPAS2Q99743 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 MTND4P4-201ENST00000439033 1366 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
NPAS2Q99743 RNU1-57P-201ENST00000384491 166 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2□□□□□ -2.09
NPAS2Q99743 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2□□□□□ -2.09
NPAS2Q99743 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2□□□□□ -2.09
NPAS2Q99743 AC119618.1-201ENST00000434191 222 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2□□□□□ -2.09
NPAS2Q99743 TAF9P1-201ENST00000445421 515 ntBASIC2□□□□□ -2.09
NPAS2Q99743 PSPHP1-201ENST00000450062 261 ntBASIC2□□□□□ -2.09
NPAS2Q99743 TAF9P2-201ENST00000454958 515 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2□□□□□ -2.09
NPAS2Q99743 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2□□□□□ -2.09
NPAS2Q99743 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2□□□□□ -2.09
NPAS2Q99743 FABP5P5-201ENST00000515537 406 ntBASIC2□□□□□ -2.09
NPAS2Q99743 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2□□□□□ -2.09
NPAS2Q99743 AP004607.1-201ENST00000524456 203 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2□□□□□ -2.09
NPAS2Q99743 AC009977.1-201ENST00000586015 570 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AL138889.2-201ENST00000603883 242 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AC025811.1-201ENST00000604312 472 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AC009878.1-201ENST00000621819 340 ntBASIC2□□□□□ -2.09
NPAS2Q99743 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2□□□□□ -2.09
NPAS2Q99743 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2□□□□□ -2.09
NPAS2Q99743 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
NPAS2Q99743 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
NPAS2Q99743 RBBP8P1-201ENST00000449447 1844 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 RNU6-858P-201ENST00000362436 107 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 RNU5E-1-201ENST00000362477 120 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 SNORA25B-201ENST00000365507 128 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 RNU6-72P-201ENST00000384285 79 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 SNORD116-8-201ENST00000384365 95 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
NPAS2Q99743 MIR1289-2-201ENST00000408360 111 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 Y_RNA.598-201ENST00000410480 95 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.99□□□□□ -2.09
NPAS2Q99743 AIMP1P2-201ENST00000425294 312 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.99□□□□□ -2.09
NPAS2Q99743 AL589872.1-201ENST00000426602 288 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AL022238.1-201ENST00000442557 355 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 SNRPGP9-201ENST00000456025 225 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 HMGB1P30-201ENST00000492455 606 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AC022493.1-201ENST00000492984 337 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AC010587.1-201ENST00000505809 469 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AC022878.1-201ENST00000530684 149 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.99□□□□□ -2.09
NPAS2Q99743 RPL21P5-201ENST00000554662 472 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AC008088.1-201ENST00000580993 280 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 BNIP3P30-201ENST00000601184 574 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AC073410.2-201ENST00000603240 332 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 AC121247.2-201ENST00000604776 136 ntBASIC1.99□□□□□ -2.09
NPAS2Q99743 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.99□□□□□ -2.09
NPAS2Q99743 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
NPAS2Q99743 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.98□□□□□ -2.09
NPAS2Q99743 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NPAS2Q99743 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NPAS2Q99743 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 RNU6-942P-201ENST00000363002 107 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 U3.4-201ENST00000363352 213 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 HMGN2P39-201ENST00000398005 273 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 MRPL42P2-201ENST00000403169 426 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 SNORA11.4-201ENST00000408823 129 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.98□□□□□ -2.09
NPAS2Q99743 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.98□□□□□ -2.09
NPAS2Q99743 AC012308.1-201ENST00000451232 178 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 RAP1BP2-201ENST00000478270 544 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.98□□□□□ -2.09
NPAS2Q99743 AC112206.3-201ENST00000514578 389 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.98□□□□□ -2.09
NPAS2Q99743 AC034114.1-201ENST00000520293 285 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 CR383656.8-201ENST00000549046 145 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 ADI1P3-201ENST00000549509 470 ntBASIC1.98□□□□□ -2.09
NPAS2Q99743 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.98□□□□□ -2.09
NPAS2Q99743 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms