Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RNU6-475P-201ENST00000516073 104 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 RNU6-581P-201ENST00000516214 105 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AL117187.1-201ENST00000555482 181 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AC021739.1-201ENST00000559631 174 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 HMGN2P15-201ENST00000585707 270 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AL591034.3-201ENST00000605511 685 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.33□□□□□ -2.04
LITAFQ99732 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 MIR7703-201ENST00000620784 77 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 MIR4302-201ENST00000638058 60 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AC241585.2-209ENST00000638217 143 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LITAFQ99732 AC110491.1-201ENST00000562191 2010 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.33□□□□□ -2.04
LITAFQ99732 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
LITAFQ99732 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
LITAFQ99732 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.33□□□□□ -2.04
LITAFQ99732 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.33□□□□□ -2.04
LITAFQ99732 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LITAFQ99732 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LITAFQ99732 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
LITAFQ99732 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.33□□□□□ -2.04
LITAFQ99732 MFSD8-233ENST00000641482 4860 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LITAFQ99732 AC008669.1-201ENST00000565823 2178 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.32□□□□□ -2.04
LITAFQ99732 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LITAFQ99732 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
LITAFQ99732 Y_RNA.123-201ENST00000363338 102 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 RNA5SP130-201ENST00000364431 114 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 RNA5SP515-201ENST00000364570 118 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 RNA5SP509-201ENST00000364577 119 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 RNU4-42P-201ENST00000364738 142 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 Y_RNA.455-201ENST00000384230 98 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 BTF3L4P2-201ENST00000392798 346 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 MIR548F4-201ENST00000408515 105 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 Y_RNA.605-201ENST00000410577 105 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.32□□□□□ -2.04
LITAFQ99732 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.32□□□□□ -2.04
LITAFQ99732 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.32□□□□□ -2.04
LITAFQ99732 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.32□□□□□ -2.04
LITAFQ99732 AC243964.1-201ENST00000441814 261 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 NUTF2P3-201ENST00000448540 384 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 AL162151.2-201ENST00000448875 158 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 CHEK2P4-201ENST00000450340 246 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 NUTF2P7-201ENST00000453086 375 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 AC010099.1-201ENST00000455434 375 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 AC011276.1-201ENST00000469688 323 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 RNU7-4P-201ENST00000516961 62 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 CR383656.8-201ENST00000549046 145 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.32□□□□□ -2.04
LITAFQ99732 AC004584.2-201ENST00000570407 410 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.32□□□□□ -2.04
LITAFQ99732 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC2.32□□□□□ -2.04
LITAFQ99732 MIR1244-1-201ENST00000612829 85 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 AL138880.2-201ENST00000616214 239 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 AC068831.7-201ENST00000616954 363 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 MIR6826-201ENST00000617808 98 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 AC091953.3-201ENST00000623220 236 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.32□□□□□ -2.04
LITAFQ99732 MIR1244-3-201ENST00000635744 85 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 MIR4272-201ENST00000635924 64 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 MIR1244-2-201ENST00000636449 85 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 MIR1244-4-202ENST00000636813 85 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.32□□□□□ -2.04
LITAFQ99732 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
LITAFQ99732 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LITAFQ99732 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
LITAFQ99732 ADAM3A-203ENST00000461344 2157 ntBASIC2.32□□□□□ -2.04
LITAFQ99732 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.32□□□□□ -2.04
LITAFQ99732 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.31□□□□□ -2.04
LITAFQ99732 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.31□□□□□ -2.04
LITAFQ99732 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LITAFQ99732 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.31□□□□□ -2.04
LITAFQ99732 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LITAFQ99732 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.31□□□□□ -2.04
LITAFQ99732 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LITAFQ99732 RNU6-858P-201ENST00000362436 107 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 RNY3P11-201ENST00000364153 102 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
LITAFQ99732 Y_RNA.389-201ENST00000383924 113 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 MIR625-201ENST00000385047 85 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 RNU6-700P-201ENST00000391043 107 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 RNA5SP38-201ENST00000410750 119 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 HMGB3P2-201ENST00000411913 584 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 AC074117.2-201ENST00000417130 397 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 AC096644.2-201ENST00000429278 159 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.31□□□□□ -2.04
LITAFQ99732 AL714022.1-201ENST00000439897 151 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 SSXP4-201ENST00000451349 245 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.31□□□□□ -2.04
LITAFQ99732 AC112492.4-201ENST00000456549 352 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 CEACAMP4-201ENST00000457676 421 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 RN7SL75P-201ENST00000461926 281 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 MTATP8P1-201ENST00000467115 207 ntBASIC2.31□□□□□ -2.04
LITAFQ99732 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms