Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC133134.1-201ENST00000466800 359 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AC087884.1-201ENST00000469738 328 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 RPL23AP70-201ENST00000483361 460 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AC083904.1-201ENST00000487828 231 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AC105137.2-201ENST00000569073 466 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 MIR2682-201ENST00000580305 110 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 RPS15AP11-201ENST00000594193 385 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AC245389.1-201ENST00000605141 529 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AL121757.2-201ENST00000611223 313 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AL162274.2-201ENST00000614406 332 ntBASIC2.81□□□□□ -1.96
NR1H4Q96RI1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NR1H4Q96RI1 Z75746.1-201ENST00000440243 2080 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 RNU1-35P-201ENST00000362782 153 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 SNORD114-19-201ENST00000363072 75 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 Y_RNA.126-201ENST00000363382 111 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 SNORD113-7-201ENST00000363762 77 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 RNU6-522P-201ENST00000364497 107 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 MIR181A2-201ENST00000384863 110 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 FO393413.1-201ENST00000402892 195 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 RPS29P4-201ENST00000414733 161 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 RPL21P23-201ENST00000446654 460 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 VN1R34P-201ENST00000447387 883 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 FGF7P6-202ENST00000451282 293 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 AC112771.1-201ENST00000463581 102 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 AC008155.2-201ENST00000464337 397 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 AC117503.1-201ENST00000472241 394 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 RNU6-1069P-201ENST00000516612 133 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 SCARNA3-201ENST00000517097 143 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 MIR3199-1-201ENST00000582434 88 ntBASIC2.8□□□□□ -1.96
NR1H4Q96RI1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
NR1H4Q96RI1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 RNU6-214P-201ENST00000384130 107 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 RNA5SP390-201ENST00000410191 113 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 SYF2P2-201ENST00000417620 583 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 USP9YP20-201ENST00000419224 558 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AC097463.2-201ENST00000421074 142 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 BX276092.3-201ENST00000424182 230 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 MRPS10P2-201ENST00000431226 381 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 RPS15AP10-201ENST00000432472 382 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 MICF-203ENST00000432679 129 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 NFU1P2-201ENST00000448700 469 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 TRBVA-201ENST00000498804 316 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AK3P2-201ENST00000507976 429 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 COPS8P3-201ENST00000526024 482 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 MIR5692C1-201ENST00000585309 91 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 BNIP3P25-201ENST00000596023 559 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AL049779.4-201ENST00000604500 156 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AC069200.1-201ENST00000609511 323 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AC024581.2-201ENST00000619986 252 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 AC100810.6-201ENST00000638068 285 ntBASIC2.79□□□□□ -1.96
NR1H4Q96RI1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NR1H4Q96RI1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC080128.1-201ENST00000474389 1917 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 OR56A5-201ENST00000340110 738 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 RNA5SP50-201ENST00000363731 107 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 RNU6-461P-201ENST00000364195 107 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC018644.1-201ENST00000429934 551 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AL139415.2-201ENST00000431968 163 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H4Q96RI1 NDUFA5P4-201ENST00000436704 385 ntBASIC2.78□□□□□ -1.96
NR1H4Q96RI1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms