Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.04□□□□□ -1.76
SHDQ96IW2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.04□□□□□ -1.76
SHDQ96IW2 U6.105-201ENST00000637379 88 ntBASIC4.04□□□□□ -1.76
SHDQ96IW2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SHDQ96IW2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHDQ96IW2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
SHDQ96IW2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHDQ96IW2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHDQ96IW2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHDQ96IW2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.04□□□□□ -1.76
SHDQ96IW2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
SHDQ96IW2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.03□□□□□ -1.76
SHDQ96IW2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHDQ96IW2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.03□□□□□ -1.76
SHDQ96IW2 AL136164.4-201ENST00000625013 2135 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHDQ96IW2 RNU4-50P-201ENST00000364361 141 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 SNORA12.2-201ENST00000391040 156 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 MIR1252-201ENST00000408861 65 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.03□□□□□ -1.76
SHDQ96IW2 IPO7P1-201ENST00000442031 636 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 SSXP4-201ENST00000451349 245 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 CYCSP35-201ENST00000451978 304 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.03□□□□□ -1.76
SHDQ96IW2 RNA5SP164-201ENST00000516533 110 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.03□□□□□ -1.76
SHDQ96IW2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.03□□□□□ -1.76
SHDQ96IW2 MIR3149-201ENST00000584629 83 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 AL021879.1-201ENST00000611756 288 ntBASIC4.03□□□□□ -1.76
SHDQ96IW2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.03□□□□□ -1.76
SHDQ96IW2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.03□□□□□ -1.76
SHDQ96IW2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHDQ96IW2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.77
SHDQ96IW2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SHDQ96IW2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHDQ96IW2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHDQ96IW2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHDQ96IW2 AL079305.1-201ENST00000623159 3008 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHDQ96IW2 Y_RNA.111-201ENST00000363248 100 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 RNY3P11-201ENST00000364153 102 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 Y_RNA.452-201ENST00000384202 108 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 RNU6-198P-201ENST00000384258 104 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 Y_RNA.574-201ENST00000384766 95 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 MIR218-2-201ENST00000385006 110 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 MIR190B-201ENST00000401119 79 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 NDUFB4P4-201ENST00000404822 243 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 Z92545.1-201ENST00000411782 234 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AL160275.2-201ENST00000412010 394 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.02□□□□□ -1.77
SHDQ96IW2 CYCSP32-201ENST00000440548 321 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.02□□□□□ -1.77
SHDQ96IW2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.02□□□□□ -1.77
SHDQ96IW2 U8.20-201ENST00000459445 131 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 RNU7-23P-201ENST00000459465 62 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AL133162.1-201ENST00000463228 453 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AC104564.1-201ENST00000493028 407 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 RPL22P13-201ENST00000493291 347 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.02□□□□□ -1.77
SHDQ96IW2 MRPS35P2-201ENST00000508242 191 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 ACA59.2-201ENST00000517061 156 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 Y_RNA.715-201ENST00000517082 110 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.02□□□□□ -1.77
SHDQ96IW2 YPEL5P3-201ENST00000547227 352 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AL161670.1-201ENST00000554348 137 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.02□□□□□ -1.77
SHDQ96IW2 MIR4503-201ENST00000582187 83 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.02□□□□□ -1.77
SHDQ96IW2 RPL23AP78-201ENST00000599928 470 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AC025946.2-201ENST00000603398 234 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AC012531.5-201ENST00000611375 151 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 MIR7975-201ENST00000619350 68 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 AC138305.3-201ENST00000624988 240 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.02□□□□□ -1.77
SHDQ96IW2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SHDQ96IW2 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.02□□□□□ -1.77
SHDQ96IW2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
SHDQ96IW2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHDQ96IW2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.01□□□□□ -1.77
SHDQ96IW2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHDQ96IW2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.01□□□□□ -1.77
SHDQ96IW2 OTUD4P1-201ENST00000237841 3067 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHDQ96IW2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHDQ96IW2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHDQ96IW2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHDQ96IW2 U3.13-201ENST00000364804 214 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 RNU1-140P-201ENST00000365040 165 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 Y_RNA.405-201ENST00000383979 100 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 Y_RNA.451-201ENST00000384200 100 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 Y_RNA.524-201ENST00000384564 100 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 Y_RNA.561-201ENST00000384694 100 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHDQ96IW2 MIR1251-201ENST00000408552 70 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 Y_RNA.592-201ENST00000410274 109 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 RNA5SP38-201ENST00000410750 119 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 AC114482.1-201ENST00000418010 247 ntBASIC4.01□□□□□ -1.77
SHDQ96IW2 AC245291.1-201ENST00000419501 328 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms