Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RBBP8P1-201ENST00000449447 1844 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 SNORD3E-201ENST00000362899 217 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 SNORD114-19-201ENST00000363072 75 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 RNU6-622P-201ENST00000384272 103 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 RNU6-72P-201ENST00000384285 79 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AL627390.1-201ENST00000396055 340 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 RNU2-48P-201ENST00000410694 191 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 RNA5SP450-201ENST00000411206 102 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC098592.1-201ENST00000419352 333 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AL627311.1-201ENST00000431514 115 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 RPL22P17-201ENST00000438729 315 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AL606517.1-201ENST00000446914 387 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 KATNBL1P6-201ENST00000453433 915 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 MTCO2P29-201ENST00000465212 189 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 RNU7-51P-201ENST00000516560 62 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 IMMP1LP2-201ENST00000552954 492 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC015712.3-201ENST00000559380 164 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AL138889.2-201ENST00000603883 242 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AP000240.1-201ENST00000609910 452 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 TUSC7.1-201ENST00000610969 165 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC016597.2-201ENST00000613256 341 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC091834.1-201ENST00000614543 472 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC008121.3-201ENST00000618726 433 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC024940.5-201ENST00000622889 474 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AL359757.2-201ENST00000624309 274 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 AC017037.3-201ENST00000625016 472 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 MIR3529-201ENST00000637713 78 ntBASIC1.74□□□□□ -2.13
ECHDC3Q96DC8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC073343.1-201ENST00000328239 651 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 SNORD14B-201ENST00000364533 90 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 RNU6-234P-201ENST00000365229 104 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 RNU6-533P-201ENST00000384144 107 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 Y_RNA.608-201ENST00000410647 95 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 RPS15AP12-201ENST00000419498 388 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 MTCO3P5-201ENST00000433620 714 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 MTND2P14-201ENST00000482139 351 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AP001025.1-201ENST00000486139 332 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC112206.3-201ENST00000514578 389 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 MTND4LP18-201ENST00000526864 291 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 RPL30P11-203ENST00000598995 310 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 BNIP3P39-201ENST00000601077 554 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC021646.1-201ENST00000605469 484 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AL031775.1-201ENST00000607014 887 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC126118.1-201ENST00000607744 628 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC138749.5-201ENST00000611461 208 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AL773524.1-201ENST00000614065 229 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AL359547.2-201ENST00000615810 418 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC116165.2-201ENST00000616705 206 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 AC006927.3-201ENST00000638789 384 ntBASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ECHDC3Q96DC8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 SNORD56.2-201ENST00000363242 71 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 RNU6-1032P-201ENST00000384100 107 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 MIR518A2-201ENST00000384966 87 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 MIR186-201ENST00000384988 86 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AC009518.2-201ENST00000418056 731 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AL158823.1-201ENST00000418441 478 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AL365184.2-201ENST00000431139 435 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AL451074.3-201ENST00000437709 472 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 PCMTD1P2-201ENST00000565017 355 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 MIR5697-201ENST00000578045 78 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AC073410.2-201ENST00000603240 332 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AC093788.1-201ENST00000609356 927 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.72□□□□□ -2.13
ECHDC3Q96DC8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 RNU5F-6P-201ENST00000362979 116 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 RNU6-501P-201ENST00000364072 100 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 698.6 ms