Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL159972.1-201ENST00000625150 448 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 SNORA27.3-201ENST00000364937 134 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 RNU6-1005P-201ENST00000384519 107 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 MIR95-201ENST00000385072 81 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 MIR561-201ENST00000385216 97 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 MIR888-201ENST00000401186 77 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 AL109755.1-201ENST00000401791 649 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 AL356131.1-201ENST00000405826 414 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 OR9R1P-201ENST00000412200 877 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 AC007742.1-201ENST00000425789 329 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 ELOCP26-201ENST00000436067 329 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 MTND3P4-201ENST00000453537 303 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 AC103851.1-201ENST00000506833 274 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 SNORA44.1-201ENST00000517031 108 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 AC090115.3-201ENST00000553218 849 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 BNIP3P23-201ENST00000599655 511 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 AL713866.2-201ENST00000603579 219 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 AC004853.1-201ENST00000604902 698 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
TTC28Q96AY4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TTC28Q96AY4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 RNU6-741P-201ENST00000383889 107 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 RNU6-611P-201ENST00000384276 104 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 U8.14-201ENST00000390843 143 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 TMSB4XP8-201ENST00000402089 135 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 TMSB4XP6-201ENST00000415187 135 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 TMSB4XP1-201ENST00000424567 135 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 SNRPEP9-201ENST00000436794 238 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 AL359212.1-201ENST00000556608 614 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 AL356432.3-201ENST00000568952 465 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 RNU6-91P-201ENST00000607774 107 ntBASIC0.52□□□□□ -2.33
TTC28Q96AY4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.52□□□□□ -2.33
TTC28Q96AY4 ZNF204P-201ENST00000416749 2397 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TTC28Q96AY4 Y_RNA.548-201ENST00000384656 105 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 UBE2V1P11-201ENST00000411559 285 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 EIF4EP2-201ENST00000422816 654 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AC096920.1-201ENST00000423991 241 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AL354941.1-201ENST00000438600 464 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AC079448.1-201ENST00000449377 373 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AP001025.1-201ENST00000486139 332 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.51□□□□□ -2.33
TTC28Q96AY4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
TTC28Q96AY4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.51□□□□□ -2.33
TTC28Q96AY4 AC034114.1-201ENST00000520293 285 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.51□□□□□ -2.33
TTC28Q96AY4 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.51□□□□□ -2.33
TTC28Q96AY4 AL671309.1-201ENST00000603750 544 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AL359314.1-201ENST00000616913 261 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 AC099842.1-201ENST00000619919 596 ntBASIC0.51□□□□□ -2.33
TTC28Q96AY4 RNA5SP98-201ENST00000363158 137 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 RNU6-529P-201ENST00000363383 104 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 MIR218-1-201ENST00000384999 110 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 MIR29C-201ENST00000385231 88 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 RNU2-7P-201ENST00000410794 178 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 MTND5P15-201ENST00000434246 349 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 SPINT5P-201ENST00000448174 155 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AL096803.2-201ENST00000450032 677 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 RPL36AP48-201ENST00000485521 314 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AL049874.1-201ENST00000489560 388 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC118282.2-201ENST00000508739 374 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC124293.1-201ENST00000530034 493 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TTC28Q96AY4 BNIP3P24-201ENST00000593398 557 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TTC28Q96AY4 MIR377-201ENST00000362145 69 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 Y_RNA.53-201ENST00000362765 102 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 MTCO2P31-201ENST00000402702 684 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 CCNG1P1-201ENST00000406783 885 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC097463.2-201ENST00000421074 142 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 PNRC2P1-201ENST00000423940 420 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 RPS27AP8-201ENST00000452665 445 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 HMGB1P35-201ENST00000503360 598 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms