Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNORD109A-201ENST00000459128 67 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 AC098862.1-201ENST00000504991 413 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.28□□□□□ -2.04
PTP4A1Q93096 RN7SKP132-201ENST00000516001 208 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 RN7SKP256-201ENST00000517201 314 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.28□□□□□ -2.04
PTP4A1Q93096 AP001893.2-201ENST00000526949 202 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.28□□□□□ -2.04
PTP4A1Q93096 AC243972.3-201ENST00000539655 198 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 AC008088.1-201ENST00000580993 280 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 AC073539.2-201ENST00000597113 165 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 AC121247.2-201ENST00000604776 136 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 AC078883.4-201ENST00000623218 367 ntBASIC2.28□□□□□ -2.04
PTP4A1Q93096 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.28□□□□□ -2.04
PTP4A1Q93096 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.28□□□□□ -2.05
PTP4A1Q93096 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 U8.8-201ENST00000365399 135 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 MIR1-2-201ENST00000384961 85 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AL162578.1-201ENST00000406202 378 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC025750.2-201ENST00000442609 450 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC245102.2-201ENST00000448956 180 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 MTND2P33-201ENST00000506452 1031 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 MTCO3P28-201ENST00000513351 515 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 RNU2-19P-201ENST00000517288 84 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AP002963.1-201ENST00000530590 184 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AP000763.2-201ENST00000540641 163 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 NDUFA5P6-201ENST00000542110 379 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC012414.6-201ENST00000568241 401 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 MIR3913-1-201ENST00000577744 102 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.27□□□□□ -2.05
PTP4A1Q93096 AL031601.2-202ENST00000622650 282 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 AC009161.2-201ENST00000624626 138 ntBASIC2.27□□□□□ -2.05
PTP4A1Q93096 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PTP4A1Q93096 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC008555.8-201ENST00000623602 2168 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 RNU6-859P-201ENST00000362728 107 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 RNU6-1029P-201ENST00000384109 107 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AL591034.2-201ENST00000402839 359 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 NDUFB4P4-201ENST00000404822 243 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC063976.3-201ENST00000426849 329 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC079448.1-201ENST00000449377 373 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AL137159.1-201ENST00000452808 512 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 MTCO2P6-201ENST00000463134 685 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC055731.1-201ENST00000474387 401 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 BET1P1-201ENST00000482276 359 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 MTCO3P9-201ENST00000506989 781 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 MTCYBP40-201ENST00000509390 1135 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC109479.2-201ENST00000517842 174 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC115990.1-201ENST00000526957 301 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 MIR3941-201ENST00000582572 103 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AC040904.1-201ENST00000590850 223 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AL136363.2-201ENST00000604173 851 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 AL033523.1-201ENST00000605153 153 ntBASIC2.26□□□□□ -2.05
PTP4A1Q93096 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
PTP4A1Q93096 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
PTP4A1Q93096 RNU1-23P-201ENST00000363361 144 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 RNA5SP456-201ENST00000364002 114 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 Y_RNA.324-201ENST00000365165 102 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 RNU6-715P-201ENST00000365204 103 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 RNU6-546P-201ENST00000383991 107 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 Y_RNA.480-201ENST00000384364 102 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 RNU6-606P-201ENST00000384721 111 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 RNU2-3P-201ENST00000410144 191 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.25□□□□□ -2.05
PTP4A1Q93096 USP9YP18-201ENST00000425912 695 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.25□□□□□ -2.05
PTP4A1Q93096 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.25□□□□□ -2.05
PTP4A1Q93096 GPM6BP3-201ENST00000442797 145 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AP000936.2-201ENST00000447151 681 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AL162395.1-201ENST00000457882 422 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.25□□□□□ -2.05
PTP4A1Q93096 RPS29P15-201ENST00000458329 171 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.25□□□□□ -2.05
PTP4A1Q93096 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PTP4A1Q93096 AC010493.1-201ENST00000513479 292 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AC107953.1-201ENST00000522216 297 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms