Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
DDX1Q92499 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
DDX1Q92499 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX1Q92499 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
DDX1Q92499 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX1Q92499 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX1Q92499 AC138393.1-203ENST00000327086 343 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 Y_RNA.151-201ENST00000363566 112 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 SNORA5A-201ENST00000384111 134 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 RNU6-746P-201ENST00000384112 109 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 Y_RNA.462-201ENST00000384268 102 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 RNU1-89P-201ENST00000384592 164 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 Y_RNA.539-201ENST00000384635 107 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX1Q92499 AL445529.1-201ENST00000398713 389 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 RNU6-1156P-201ENST00000410365 100 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 Y_RNA.623-201ENST00000411128 95 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 CYCSP33-201ENST00000414485 327 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 RPS15AP6-201ENST00000420703 385 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 BX276092.3-201ENST00000424182 230 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 AC007560.1-201ENST00000426912 237 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 AL627311.1-201ENST00000431514 115 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX1Q92499 TRBV12-2-201ENST00000489763 344 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.08□□□□□ -1.76
DDX1Q92499 RNA5SP208-201ENST00000516156 78 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX1Q92499 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX1Q92499 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX1Q92499 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX1Q92499 AC107016.1-201ENST00000550463 337 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
DDX1Q92499 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX1Q92499 AC090517.1-201ENST00000569307 266 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 MIR3910-1-201ENST00000580936 111 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 RNU6-85P-201ENST00000605989 107 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 U6.104-201ENST00000637979 90 ntBASIC4.08□□□□□ -1.76
DDX1Q92499 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX1Q92499 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX1Q92499 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX1Q92499 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX1Q92499 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
DDX1Q92499 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX1Q92499 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
DDX1Q92499 Y_RNA.19-201ENST00000362462 99 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 RNU6-1329P-201ENST00000365664 107 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 SNORA1.3-201ENST00000384676 136 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 MIR548I2-201ENST00000408348 149 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 AP000275.1-201ENST00000411943 390 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX1Q92499 MYL8P-204ENST00000431574 518 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 AL133396.1-201ENST00000432048 687 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX1Q92499 RN7SL93P-201ENST00000463035 293 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 AC026784.1-201ENST00000507986 352 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 RNU1-86P-201ENST00000516108 154 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 RNU1-107P-201ENST00000516617 154 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 RNU6-572P-201ENST00000516724 80 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 SNORA31.19-201ENST00000517079 126 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 RNU6-897P-201ENST00000517135 105 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 SNORA81.3-201ENST00000517283 198 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 AC109329.1-201ENST00000518744 317 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 AC109446.1-201ENST00000566172 220 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX1Q92499 OR1M4P-201ENST00000589199 287 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 ELOCP5-201ENST00000604924 333 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX1Q92499 U6.99-201ENST00000637524 83 ntBASIC4.07□□□□□ -1.76
DDX1Q92499 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX1Q92499 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX1Q92499 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX1Q92499 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
DDX1Q92499 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX1Q92499 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
DDX1Q92499 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX1Q92499 RNY1-201ENST00000364228 113 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 Y_RNA.416-201ENST00000384014 113 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 MIR183-201ENST00000384958 110 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 MIR517A-201ENST00000385001 87 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 MIR34A-201ENST00000385130 110 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 RPS4XP3-201ENST00000398541 413 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX1Q92499 HMGN2P31-201ENST00000432430 273 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX1Q92499 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX1Q92499 LINC01399-202ENST00000458450 244 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX1Q92499 HMGN1P11-201ENST00000508668 303 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 RNU5B-3P-201ENST00000516601 115 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX1Q92499 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX1Q92499 HMGB1P14-201ENST00000557424 591 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 MIR3124-201ENST00000582636 67 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 SNORA62.6-201ENST00000606322 83 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 MIR6076-201ENST00000617521 113 ntBASIC4.06□□□□□ -1.76
DDX1Q92499 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX1Q92499 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
DDX1Q92499 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX1Q92499 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX1Q92499 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms