Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 RPL32P28-201ENST00000443577 397 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 NIPA2P5-201ENST00000452282 464 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC116655.1-201ENST00000508324 901 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 RNU6-1332P-201ENST00000516666 104 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 RNU6-1088P-201ENST00000516850 104 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 MIR2276-201ENST00000516886 89 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC025281.1-201ENST00000567026 265 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC005261.5-201ENST00000596280 355 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC009994.1-201ENST00000606889 253 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AL022345.1-201ENST00000607292 135 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC011890.2-201ENST00000613393 294 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC091903.1-201ENST00000624322 454 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AL133216.2-202ENST00000634512 349 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AC110774.1-201ENST00000623567 2018 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 MTND4P12-201ENST00000498999 1377 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 RNU1-105P-201ENST00000363470 161 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 Y_RNA.212-201ENST00000364177 102 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 RNU5E-4P-201ENST00000364931 120 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 RNU6-1280P-201ENST00000365211 107 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 CD24P4-201ENST00000382840 243 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 SNORD73A-201ENST00000386062 65 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 RNU6-750P-201ENST00000390946 107 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 RNU6-55P-201ENST00000411092 107 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 RNU6-954P-201ENST00000411355 107 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AC093151.1-201ENST00000427711 313 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AL161651.1-201ENST00000440882 223 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 PPP1R2P5-201ENST00000457256 603 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AC010401.1-201ENST00000463867 348 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 RN7SL442P-201ENST00000473804 320 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 SNORD19.2-201ENST00000516978 73 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 COPS8P3-201ENST00000526024 482 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 MIR3186-201ENST00000577404 85 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AC100830.2-201ENST00000581636 240 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 RPL12P50-201ENST00000603116 116 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AP000787.2-201ENST00000604432 568 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.11□□□□□ -1.91
HMGB4Q8WW32 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB4Q8WW32 Y_RNA.70-201ENST00000362886 110 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 RNU6-78P-201ENST00000362897 107 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 FTH1P15-201ENST00000406984 280 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC022028.1-201ENST00000412054 408 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC096649.2-201ENST00000416186 393 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 RPL7P37-201ENST00000425095 738 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC006539.3-201ENST00000454258 129 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 RPS27P26-201ENST00000494583 239 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC114781.4-201ENST00000513707 639 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 SNORA43.2-201ENST00000516652 128 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 GTF3AP2-201ENST00000557014 266 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 MIR4672-201ENST00000583126 81 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC091135.1-201ENST00000585943 307 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC020895.1-201ENST00000595362 272 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC024153.1-201ENST00000603103 365 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 uc_338.5-201ENST00000611839 155 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC110079.1-202ENST00000635213 138 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 U4.7-201ENST00000638126 106 ntBASIC3.1□□□□□ -1.91
HMGB4Q8WW32 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HMGB4Q8WW32 AC010889.1-201ENST00000566193 2666 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 RNU5E-7P-201ENST00000365290 117 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 RNU6-1329P-201ENST00000365664 107 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 SNORD116-11-201ENST00000383882 92 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 RNU6-214P-201ENST00000384130 107 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms