Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AL049555.1-201ENST00000562834 1933 ntBASIC4.26□□□□□ -1.73
LINC00116Q8NCU8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LINC00116Q8NCU8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LINC00116Q8NCU8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.26□□□□□ -1.73
LINC00116Q8NCU8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LINC00116Q8NCU8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LINC00116Q8NCU8 AC073073.2-201ENST00000609827 2578 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 RNU1-18P-201ENST00000363062 164 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 SNORA20.1-201ENST00000364790 130 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 RNU1-140P-201ENST00000365040 165 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 Y_RNA.477-201ENST00000384352 108 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 MIR628-201ENST00000385229 95 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 MTCO3P19-201ENST00000415864 321 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 AC007098.1-201ENST00000420122 367 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 AL353705.1-201ENST00000433468 480 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 AC092573.2-201ENST00000434546 243 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 RN7SL863P-201ENST00000462370 296 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 IGKV2D-23-201ENST00000518179 286 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 AMZ2P1-203ENST00000565833 850 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 MIR7106-201ENST00000612419 65 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 AC141273.2-201ENST00000618989 130 ntBASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LINC00116Q8NCU8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AL592437.2-201ENST00000421655 2434 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 ZNF299P-201ENST00000406845 1804 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 Y_RNA.14-201ENST00000362415 103 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 Y_RNA.60-201ENST00000362831 98 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 RNU6-827P-201ENST00000365553 106 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 RNU6-629P-201ENST00000384061 103 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 SAR1AP2-201ENST00000392696 594 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 RNU6-897P-201ENST00000517135 105 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 HIGD1AP1-201ENST00000550979 275 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AL390123.1-201ENST00000603216 237 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AC009314.1-201ENST00000603871 304 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AC093732.2-201ENST00000607950 274 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AC096772.1-201ENST00000609146 564 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 AL159153.1-201ENST00000619688 317 ntBASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
LINC00116Q8NCU8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AL365361.1-201ENST00000566942 3481 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 DEFB108F-201ENST00000344638 222 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 RNU6-384P-201ENST00000364900 104 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 SNORA69.1-201ENST00000390904 137 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 RNU6-700P-201ENST00000391043 107 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 SNORD56-201ENST00000413522 71 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AL592148.1-201ENST00000413568 445 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 RPS12P23-201ENST00000419579 400 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 SUMO1P3-201ENST00000439961 304 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 U8.21-201ENST00000459536 136 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 RPL39P38-201ENST00000467018 153 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AC022795.1-201ENST00000473808 480 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 RNU6-570P-201ENST00000517051 105 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AC084851.1-201ENST00000529105 249 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AL365434.2-201ENST00000607979 234 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AC004852.3-201ENST00000614131 326 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AC130454.1-201ENST00000622948 401 ntBASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LINC00116Q8NCU8 MTND5P6-201ENST00000422338 1798 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 MTND5P9-201ENST00000503854 1755 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 AC000123.3-201ENST00000624029 4975 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 MIR412-201ENST00000362142 91 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 RNU1-70P-201ENST00000362618 164 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 SNORA5B-201ENST00000363786 132 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 RNU6-209P-201ENST00000384118 107 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms