Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RNA5SP138-201ENST00000365098 114 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 Y_RNA.318-201ENST00000365131 97 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RNU6-487P-201ENST00000365430 104 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RNU6-843P-201ENST00000384454 104 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RNU6-393P-201ENST00000384475 107 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 SNORD70.1-201ENST00000391007 85 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RAP1BP3-201ENST00000407180 549 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 SRIP2-201ENST00000428470 166 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 DLGAP5P1-201ENST00000430307 464 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 VN1R108P-201ENST00000431580 830 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AL606489.2-201ENST00000433886 234 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 FDX1P2-201ENST00000450769 375 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 SNRPFP3-201ENST00000457792 225 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RNU7-180P-201ENST00000459240 63 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RPL36AP48-201ENST00000485521 314 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 SNORA43.2-201ENST00000516652 128 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AL137161.1-201ENST00000532231 390 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC023824.2-201ENST00000566185 400 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 MIR5583-1-201ENST00000580941 59 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RPS15AP11-201ENST00000594193 385 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AL136363.2-201ENST00000604173 851 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC069294.1-201ENST00000608397 350 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC026585.1-201ENST00000619582 524 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC068792.1-201ENST00000621354 417 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 Z69720.2-201ENST00000624755 279 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 MIR1291-201ENST00000627649 87 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 MIR3529-201ENST00000637713 78 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 Z75746.1-201ENST00000440243 2080 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC016717.2-201ENST00000609089 5141 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC138393.1-203ENST00000327086 343 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 OR56A5-201ENST00000340110 738 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 SNORA38.1-201ENST00000364172 131 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 RNU6-434P-201ENST00000384376 107 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 RNA5SP338-201ENST00000410495 85 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC097463.2-201ENST00000421074 142 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 TOMM20P4-201ENST00000427861 435 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC016691.1-201ENST00000441321 413 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AL135938.1-201ENST00000443141 297 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 IFNA11P-201ENST00000446352 526 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC011753.1-201ENST00000451001 220 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC112771.1-201ENST00000463581 102 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC011825.1-201ENST00000484967 388 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AP001025.1-201ENST00000486139 332 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC096576.1-201ENST00000489014 359 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 RPL9P6-201ENST00000492764 598 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 RPL22P13-201ENST00000493291 347 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 SMURF2P1-201ENST00000514992 481 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 RN7SKP24-201ENST00000515888 284 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 SNORA25.11-201ENST00000515935 105 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC104383.1-201ENST00000530297 370 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 BNIP3P6-201ENST00000549284 499 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC136619.2-201ENST00000563361 631 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC021646.1-201ENST00000605469 484 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AL354950.2-201ENST00000617939 290 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AL158209.2-201ENST00000619266 216 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC073534.2-201ENST00000620377 381 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC139792.3-201ENST00000623525 224 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 AC124864.2-201ENST00000624736 186 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 MIR6863-201ENST00000636112 90 ntBASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC197Q8NCU1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 RNU6-78P-201ENST00000362897 107 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 RNU1-72P-201ENST00000362976 153 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 Y_RNA.255-201ENST00000364581 97 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 RNU6-622P-201ENST00000384272 103 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 SNORD116-20-201ENST00000384529 92 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 AL360182.1-201ENST00000397433 468 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.25□□□□□ -2.05
CCDC197Q8NCU1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms