Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU6-1069P-201ENST00000516612 133 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RNU6-572P-201ENST00000516724 80 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC107953.1-201ENST00000522216 297 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 CYCSP27-201ENST00000527643 293 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC087241.2-201ENST00000535801 324 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 MIR4319-201ENST00000577285 85 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 UBE2V2P2-201ENST00000587677 504 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC009248.2-201ENST00000619826 254 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 RNU1-73P-201ENST00000383971 164 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 SNORA18.3-201ENST00000384122 132 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 RNU6-510P-201ENST00000391239 108 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 HMGN2P30-201ENST00000423237 256 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AL627311.1-201ENST00000431514 115 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 NDUFA5P4-201ENST00000436704 385 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AL714022.1-201ENST00000439897 151 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AL078601.1-201ENST00000444542 271 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC092798.1-201ENST00000458542 409 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC087884.1-201ENST00000469738 328 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 MIR892C-201ENST00000516410 77 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AL391261.3-201ENST00000557194 520 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC138761.3-201ENST00000579993 334 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AL645944.1-201ENST00000603857 493 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 LARP7P1-201ENST00000605576 316 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AC007318.2-201ENST00000620999 243 ntBASIC3.16□□□□□ -1.9
VPS52Q8N1B4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS52Q8N1B4 AL136360.1-201ENST00000503377 1900 ntBASIC3.15□□□□□ -1.9
VPS52Q8N1B4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
VPS52Q8N1B4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 RNU6-884P-201ENST00000363889 107 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 RNU6-266P-201ENST00000364225 107 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 RNU5E-4P-201ENST00000364931 120 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 Y_RNA.414-201ENST00000384011 101 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 RNA5SP184-201ENST00000411071 108 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 IFNA20P-201ENST00000436840 528 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 USP9YP8-201ENST00000441913 500 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 Z96811.1-201ENST00000445880 108 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 RPL7P12-201ENST00000446719 750 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AL583843.1-201ENST00000456070 346 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC117503.1-201ENST00000472241 394 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 TRBVA-201ENST00000498804 316 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC091951.2-201ENST00000500762 203 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 RN7SKP256-201ENST00000517201 314 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC107016.2-201ENST00000547968 190 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 CYCSP39-201ENST00000565821 309 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC025253.1-201ENST00000613623 543 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC002064.3-201ENST00000623448 346 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC073308.1-201ENST00000623696 305 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.15□□□□□ -1.91
VPS52Q8N1B4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS52Q8N1B4 SNORD113-7-201ENST00000363762 77 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 Z98749.2-208ENST00000381646 500 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RNU6-831P-201ENST00000384548 107 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RN7SKP32-201ENST00000410167 303 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS52Q8N1B4 PDCL2P1-201ENST00000419302 352 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 AC093151.1-201ENST00000427711 313 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 HMGB1P9-201ENST00000429856 646 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RPL37P4-201ENST00000448908 268 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 AC108938.1-201ENST00000451204 136 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RNU6-329P-201ENST00000459618 107 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RPS27AP10-201ENST00000496103 208 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 AC008628.2-201ENST00000502605 298 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 SNORA19.2-201ENST00000516013 114 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 RNU6-875P-201ENST00000516488 106 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms