Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AL591806.2-201ENST00000433122 173 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 GTF2IP13-201ENST00000438487 386 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 HIGD1AP2-201ENST00000446367 280 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 RPL7P12-201ENST00000446719 750 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 PMCHL2-203ENST00000457791 237 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC083904.1-201ENST00000487828 231 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC139453.3-201ENST00000493276 369 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC008628.2-201ENST00000502605 298 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 TBCAP3-201ENST00000512475 312 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-189P-201ENST00000516120 101 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 Y_RNA.702-201ENST00000516843 96 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-928P-201ENST00000516876 104 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 OR11H5P-201ENST00000554039 926 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC025754.2-201ENST00000606491 432 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 FTX_3.1-201ENST00000610451 147 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 DUSP12P1-201ENST00000612874 516 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC063943.3-201ENST00000615562 356 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC073308.1-201ENST00000623696 305 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC022336.2-201ENST00000568966 2538 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 MAPK10-266ENST00000641066 6555 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 RNU5E-4P-201ENST00000364931 120 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 Y_RNA.399-201ENST00000383955 105 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AL135786.1-201ENST00000415892 214 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 RNU7-167P-201ENST00000459160 62 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 RPL21P93-201ENST00000480465 489 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AC008716.1-201ENST00000511084 513 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AC112206.3-201ENST00000514578 389 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AC025755.1-201ENST00000521306 278 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 MIR3605-201ENST00000583214 100 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AC107294.3-201ENST00000609211 526 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AC022306.2-201ENST00000617563 647 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AC022418.1-201ENST00000624118 445 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 MTND4P12-201ENST00000498999 1377 ntBASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
KRT28Q7Z3Y7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 AC108206.1-201ENST00000570186 4159 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-767P-201ENST00000384132 107 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 USP9YP20-201ENST00000419224 558 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 AC007560.1-201ENST00000426912 237 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 AL360271.2-201ENST00000447710 161 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 AL353705.4-201ENST00000449661 238 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 RPS27P29-201ENST00000463110 252 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 DYNLL1P5-201ENST00000467158 270 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 HMGB1P30-201ENST00000492455 606 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 AC022493.1-201ENST00000492984 337 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 MTND3P25-201ENST00000509243 135 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-991P-201ENST00000516168 107 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 Y_RNA.665-201ENST00000516177 98 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-1314P-201ENST00000517139 104 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 PSMA3P-201ENST00000555485 635 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 HMGB1P14-201ENST00000557424 591 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 DEFB122-202ENST00000569013 197 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 VN1R80P-201ENST00000597126 338 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 AL136221.1-201ENST00000621449 509 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 U6.99-201ENST00000637524 83 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 AC241585.2-209ENST00000638217 143 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 MTND5P27-201ENST00000428871 1720 ntBASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
KRT28Q7Z3Y7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-510P-201ENST00000391239 108 ntBASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 DPH3P2-201ENST00000422618 250 ntBASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 RPS29P6-201ENST00000438196 145 ntBASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 RNA5SP380-201ENST00000517190 98 ntBASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 MIR3941-201ENST00000582572 103 ntBASIC3.48□□□□□ -1.85
KRT28Q7Z3Y7 AC073539.2-201ENST00000597113 165 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms