Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBE3BQ7Z3V4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBE3BQ7Z3V4 AC005183.1-201ENST00000603687 1979 ntBASIC3.71□□□□□ -1.82
UBE3BQ7Z3V4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 RNA5SP383-201ENST00000362934 120 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.146-201ENST00000363549 102 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.197-201ENST00000364004 102 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-7-201ENST00000364784 107 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-8-201ENST00000365467 107 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-395P-201ENST00000365662 106 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 DEFB109C-201ENST00000382575 264 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 DEFB109B-201ENST00000382656 264 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-95P-201ENST00000384697 107 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 EI24P2-201ENST00000397776 1076 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 AC245054.2-201ENST00000415639 319 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 Z82205.1-201ENST00000428456 297 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.653-201ENST00000459091 95 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 HMGN1P10-201ENST00000474557 553 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 MTCYBP40-201ENST00000509390 1135 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 AC116337.1-201ENST00000509680 687 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 AC093303.1-201ENST00000514549 295 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-1016P-201ENST00000516689 94 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 AC069113.1-201ENST00000517763 267 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 AC026371.1-201ENST00000551867 419 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 AL021368.2-201ENST00000606125 5352 ntBASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3BQ7Z3V4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-50P-201ENST00000362356 103 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-741P-201ENST00000383889 107 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 SNORA18.3-201ENST00000384122 132 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-214P-201ENST00000384130 107 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-1304P-201ENST00000411374 106 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 AL590632.1-201ENST00000424289 371 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 MYL8P-204ENST00000431574 518 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 AL645568.3-201ENST00000433683 316 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 SETP5-201ENST00000437270 562 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 HMGB1P30-201ENST00000492455 606 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 AC083906.5-201ENST00000503722 328 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 RNA5SP468-201ENST00000516782 93 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.711-201ENST00000516993 102 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 AC008568.2-201ENST00000623862 2313 ntBASIC3.69□□□□□ -1.82
UBE3BQ7Z3V4 ZNF826P-207ENST00000622273 1910 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 MTND5P10-201ENST00000603719 1809 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 SNORD3E-201ENST00000362899 217 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 SNORA75B-201ENST00000384053 137 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 UBE2V1P4-201ENST00000425374 344 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 MTCO3P10-201ENST00000455912 772 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AC090096.1-201ENST00000489168 390 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AC096745.1-201ENST00000509945 370 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AC091826.1-201ENST00000514065 313 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AC093331.1-201ENST00000521474 169 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AP000889.1-201ENST00000530968 660 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AC025423.5-201ENST00000550230 219 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 CYCSP39-201ENST00000565821 309 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AL669831.3-213ENST00000636676 183 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 KPNA2P1-201ENST00000458289 1591 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 AL359693.1-201ENST00000614959 2407 ntBASIC3.68□□□□□ -1.82
UBE3BQ7Z3V4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC138393.1-203ENST00000327086 343 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 RNA5SP295-201ENST00000362655 121 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.245-201ENST00000364493 95 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-310P-201ENST00000384655 107 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-1179P-201ENST00000384667 107 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AL590383.1-201ENST00000428602 75 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 GPM6BP2-201ENST00000432046 144 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 GPM6BP1-201ENST00000446387 144 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms