Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 AL136520.1-202ENST00000555494 763 ntBASIC1.16□□□□□ -2.22
ZNF550Q7Z398 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF550Q7Z398 BNIP3P26-201ENST00000600827 554 ntBASIC1.16□□□□□ -2.22
ZNF550Q7Z398 AC006270.3-201ENST00000605967 1036 ntBASIC1.16□□□□□ -2.22
ZNF550Q7Z398 AC018926.1-201ENST00000616335 435 ntBASIC1.16□□□□□ -2.22
ZNF550Q7Z398 AL132822.1-201ENST00000617063 513 ntBASIC1.16□□□□□ -2.22
ZNF550Q7Z398 AC091304.6-201ENST00000619761 202 ntBASIC1.16□□□□□ -2.22
ZNF550Q7Z398 MIR3529-201ENST00000637713 78 ntBASIC1.16□□□□□ -2.22
ZNF550Q7Z398 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF550Q7Z398 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
ZNF550Q7Z398 AP000560.1-201ENST00000624150 1937 ntBASIC1.15□□□□□ -2.22
ZNF550Q7Z398 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 CBX3P1-201ENST00000325243 554 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 RNU6-529P-201ENST00000363383 104 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 RNU6-1274P-201ENST00000384557 107 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 SNORA40C-201ENST00000391285 128 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 RNU2-36P-201ENST00000410361 191 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AP000275.1-201ENST00000411943 390 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 RPS12P24-201ENST00000412619 387 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 ZNF886P-201ENST00000450781 723 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 HSPE1P24-201ENST00000450782 238 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 RPS3AP22-201ENST00000488297 769 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC008837.2-201ENST00000513076 418 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 MTND1P36-201ENST00000522384 936 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC098848.2-201ENST00000588023 330 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC012065.4-201ENST00000602445 679 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AP001485.1-201ENST00000604799 199 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 PRR13P7-201ENST00000605538 430 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 Z82243.1-201ENST00000609432 473 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.15□□□□□ -2.23
ZNF550Q7Z398 AC092656.1-203ENST00000624134 423 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 HAUS6P2-201ENST00000433254 2404 ntBASIC1.15□□□□□ -2.23
ZNF550Q7Z398 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 Y_RNA.311-201ENST00000365068 96 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 BTF3L4P2-201ENST00000392798 346 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 AC083875.1-201ENST00000419509 405 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 MTND1P16-201ENST00000465177 898 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 DEFB108A-201ENST00000530110 222 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 MIR4422-201ENST00000581938 83 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 WISP1-OT1-201ENST00000602893 642 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 AL358072.1-201ENST00000604156 575 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 AC124016.2-201ENST00000610058 665 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 MIR8074-201ENST00000615081 81 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 AL158163.2-201ENST00000619110 700 ntBASIC1.14□□□□□ -2.23
ZNF550Q7Z398 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.14□□□□□ -2.23
ZNF550Q7Z398 FARSBP1-201ENST00000435808 1778 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 RNU6-655P-201ENST00000362858 107 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 RNU6-166P-201ENST00000384371 107 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ZNF550Q7Z398 SNORA48.1-201ENST00000390879 135 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 USP9YP33-201ENST00000412220 421 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.13□□□□□ -2.23
ZNF550Q7Z398 USP9YP35-201ENST00000435696 412 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC118469.1-201ENST00000442943 488 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 MTCO1P27-201ENST00000448269 226 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AL590365.1-201ENST00000450788 243 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC003071.1-201ENST00000451219 789 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC108729.1-201ENST00000487812 947 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 RPL36AP21-201ENST00000490372 323 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC084364.2-201ENST00000546924 395 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 BNIP3P30-201ENST00000601184 574 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC073413.2-201ENST00000604332 360 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AL512427.1-201ENST00000618593 349 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC009269.6-201ENST00000621778 588 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC093648.1-201ENST00000623546 606 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AC099654.8-201ENST00000637757 681 ntBASIC1.13□□□□□ -2.23
ZNF550Q7Z398 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 RNU6-621P-201ENST00000364752 109 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.12□□□□□ -2.23
ZNF550Q7Z398 RNU6-843P-201ENST00000384454 104 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 RNA5SP100-201ENST00000410903 110 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 RNA5SP59-201ENST00000410922 110 ntBASIC1.12□□□□□ -2.23
ZNF550Q7Z398 UBE2V1P10-201ENST00000414685 269 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms