Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 RNU2-1-201ENST00000618664 191 ntBASIC1.85□□□□□ -2.11
TRIM40Q6P9F5 U2.6-201ENST00000619225 191 ntBASIC1.85□□□□□ -2.11
TRIM40Q6P9F5 U2.5-201ENST00000619465 191 ntBASIC1.85□□□□□ -2.11
TRIM40Q6P9F5 U2.10-201ENST00000620268 191 ntBASIC1.85□□□□□ -2.11
TRIM40Q6P9F5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM40Q6P9F5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM40Q6P9F5 HAUS6P2-201ENST00000433254 2404 ntBASIC1.85□□□□□ -2.11
TRIM40Q6P9F5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 RNU6-843P-201ENST00000384454 104 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 RNU6-1179P-201ENST00000384667 107 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 RNA5SP270-201ENST00000411361 118 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AL365203.2-201ENST00000423444 196 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 IPO7P1-201ENST00000442031 636 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 snoU109.2-201ENST00000459316 135 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 HMGB1P30-201ENST00000492455 606 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 RBBP4P6-201ENST00000508098 202 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 MTCYBP33-201ENST00000575007 1130 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AC008521.1-201ENST00000587471 187 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AC021646.1-201ENST00000605469 484 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AC093788.1-201ENST00000609356 927 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AC108479.2-201ENST00000617314 601 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AC009159.2-201ENST00000617603 606 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 AL162373.1-201ENST00000620433 407 ntBASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRIM40Q6P9F5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 RNU6-1010P-201ENST00000362757 107 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 U8.3-201ENST00000363321 132 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 RNU6-487P-201ENST00000365430 104 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 RNU1-57P-201ENST00000384491 166 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 GSTA9P-201ENST00000406231 611 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 RPS3AP3-201ENST00000411933 242 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 EEF1A1P40-201ENST00000412883 573 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL356379.1-201ENST00000414105 126 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC138623.1-201ENST00000418060 216 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 CALM1P1-201ENST00000442082 433 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC009238.1-201ENST00000442165 424 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC009237.6-201ENST00000446969 424 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL133217.1-201ENST00000450980 425 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC012308.1-201ENST00000451232 178 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC079804.2-201ENST00000490376 200 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 SCARNA24.1-201ENST00000516465 137 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 Vault.3-201ENST00000516676 95 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 SNORA48.11-201ENST00000517015 89 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 CR383656.8-201ENST00000549046 145 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC025165.5-201ENST00000602802 578 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC073410.2-201ENST00000603240 332 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL121992.2-201ENST00000606262 256 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC087683.2-201ENST00000611384 326 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL133173.2-201ENST00000614270 90 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 YWHAEP7-203ENST00000622054 312 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 SCARNA4-202ENST00000625402 129 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC019226.2-201ENST00000625973 424 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 MIR203B-201ENST00000636080 86 ntBASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRIM40Q6P9F5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 RNU6-179P-201ENST00000363350 107 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 RNU6-384P-201ENST00000364900 104 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 RNU6-169P-201ENST00000365336 107 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 RNU6-1140P-201ENST00000410517 106 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 RNU6-387P-201ENST00000411331 105 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 RNA5SP111-201ENST00000411386 101 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 MTCYBP5-201ENST00000423752 1135 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 AC008267.5-201ENST00000424928 265 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 AL360271.2-201ENST00000447710 161 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 AL136380.1-201ENST00000447970 162 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 UBL5P3-201ENST00000475112 231 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 AC109329.1-201ENST00000518744 317 ntBASIC1.82□□□□□ -2.12
TRIM40Q6P9F5 ANP32BP3-201ENST00000559213 706 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms