Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC004925.1-201ENST00000624256 2706 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 Y_RNA.193-201ENST00000363979 102 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 Y_RNA.364-201ENST00000365532 101 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 Y_RNA.452-201ENST00000384202 108 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 Y_RNA.527-201ENST00000384573 102 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 SNORD15B-201ENST00000384714 146 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 SNORA11.1-201ENST00000408133 129 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RNU2-71P-201ENST00000411395 189 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 USMG5P1-201ENST00000425964 177 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AC091390.3-201ENST00000426478 338 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RPL21P66-201ENST00000426566 466 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AC087588.1-201ENST00000462203 316 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RN7SL601P-201ENST00000471221 293 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RPL7P5-201ENST00000471472 736 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RPL31P60-201ENST00000478450 367 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AC022493.1-201ENST00000492984 337 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RN7SL504P-201ENST00000494496 287 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 GMPSP1-201ENST00000514075 579 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 TRAV37-201ENST00000553906 342 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 ZNF192P1-203ENST00000565888 810 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 BNIP3P16-201ENST00000589779 534 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AC005014.2-201ENST00000607795 599 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AC007318.2-201ENST00000620999 243 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AL031601.2-202ENST00000622650 282 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AC099506.2-201ENST00000623074 221 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 MIR622-201ENST00000638396 96 ntBASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF549Q6P9A3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 RNU6-490P-201ENST00000362985 107 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.153-201ENST00000363615 91 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 RNU6-26P-201ENST00000383985 107 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 RNU6-214P-201ENST00000384130 107 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 SNORD73A-201ENST00000386062 65 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AL513331.1-201ENST00000411908 397 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AL353621.1-201ENST00000418219 243 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 HMGB1P9-201ENST00000429856 646 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AL592045.1-201ENST00000429867 352 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 FTH1P25-201ENST00000447665 469 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 HMGB1P30-201ENST00000492455 606 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC022493.2-201ENST00000506122 481 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 RNU1-86P-201ENST00000516108 154 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 RNU1-107P-201ENST00000516617 154 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 SNORA31.20-201ENST00000517111 133 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC010653.1-201ENST00000571108 881 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 MIR3149-201ENST00000584629 83 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC006006.1-201ENST00000603082 144 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC104695.3-201ENST00000604052 296 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC012468.1-201ENST00000604888 430 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC006157.1-201ENST00000611750 366 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AL162373.1-201ENST00000620433 407 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC138627.2-201ENST00000624202 601 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.02□□□□□ -1.93
ZNF549Q6P9A3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 UBE2L2-201ENST00000254302 429 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 RNU6-505P-201ENST00000384427 107 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.557-201ENST00000384680 107 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 MIR514A1-201ENST00000385133 98 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 RNU6-907P-201ENST00000390924 102 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms