Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU4-91P-201ENST00000364778 135 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 SNORA6-201ENST00000384033 151 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 MTND3P17-201ENST00000416968 344 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC074117.2-201ENST00000417130 397 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 MTCYBP1-201ENST00000454315 1119 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 MTND3P25-201ENST00000509243 135 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 SNORA31.23-201ENST00000517219 133 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 BNIP3P6-201ENST00000549284 499 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 MIR5694-201ENST00000581190 76 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 CLIC4P2-201ENST00000601934 717 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC245014.2-201ENST00000603689 287 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 SEPT7P9-203ENST00000604116 343 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC246785.4-201ENST00000605374 287 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 AC090517.3-201ENST00000625170 141 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 RNU6-212P-201ENST00000362642 104 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 RNU6-655P-201ENST00000362858 107 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 SNORA25B-201ENST00000365507 128 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 RNU6-108P-201ENST00000365558 107 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 RNU6-297P-201ENST00000384636 107 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AL049545.1-201ENST00000401856 572 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AL591034.2-201ENST00000402839 359 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AL355497.1-201ENST00000406262 551 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 RNA5SP390-201ENST00000410191 113 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AC018634.1-201ENST00000437554 401 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 SNORA59A-201ENST00000459326 152 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 MTND3P7-201ENST00000474435 343 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AP001025.1-201ENST00000486139 332 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 SNORA31.25-201ENST00000517242 134 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AP003072.2-201ENST00000527756 676 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 IMMP1LP2-201ENST00000552954 492 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AC090897.2-201ENST00000581715 130 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AC064872.1-201ENST00000604823 1072 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AL670379.2-201ENST00000604983 252 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 RMST_4.1-201ENST00000616886 107 ntBASIC2.03□□□□□ -2.08
NIPAL3Q6P499 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.03□□□□□ -2.08
NIPAL3Q6P499 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.03□□□□□ -2.09
NIPAL3Q6P499 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 SNORD56.1-201ENST00000362913 68 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 RNU1-23P-201ENST00000363361 144 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 SNORA67.4-201ENST00000384688 142 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 RNU6-550P-201ENST00000391057 101 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 RNU2-23P-201ENST00000410545 195 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 WARS2P1-201ENST00000429678 537 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 RNU7-182P-201ENST00000459009 62 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC107032.1-201ENST00000485945 480 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 IGLV3-17-201ENST00000519099 244 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC012414.6-201ENST00000568241 401 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC007229.1-201ENST00000590455 412 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC073539.2-201ENST00000597113 165 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 Z84480.1-201ENST00000605131 311 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC007792.1-201ENST00000623023 402 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 AC011155.2-201ENST00000623202 216 ntBASIC2.02□□□□□ -2.09
NIPAL3Q6P499 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.01□□□□□ -2.09
NIPAL3Q6P499 U3.4-201ENST00000363352 213 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 RNU6-529P-201ENST00000363383 104 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 Y_RNA.201-201ENST00000364052 96 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 RNU6-74P-201ENST00000384235 107 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 MIR454-201ENST00000390180 115 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 RNU4-53P-201ENST00000410828 140 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 OR9R1P-201ENST00000412200 877 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.01□□□□□ -2.09
NIPAL3Q6P499 BX295541.1-201ENST00000417774 250 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 AC092447.3-201ENST00000426027 686 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.01□□□□□ -2.09
NIPAL3Q6P499 RPL23AP49-201ENST00000492925 468 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 AC008413.1-201ENST00000511864 177 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 AC074344.1-201ENST00000512823 224 ntBASIC2.01□□□□□ -2.09
NIPAL3Q6P499 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.01□□□□□ -2.09
NIPAL3Q6P499 RNA5SP137-201ENST00000516833 135 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms