Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 RNU4-28P-201ENST00000364739 141 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 RNU6-190P-201ENST00000384154 102 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 SNORA40C-201ENST00000391285 128 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 EIF1AXP1-201ENST00000419267 435 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AC244636.1-201ENST00000421152 228 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AC010099.3-201ENST00000423896 409 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AC119618.1-201ENST00000434191 222 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AC112204.1-201ENST00000502591 103 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 SNORA3.4-201ENST00000515969 96 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 RNU6-991P-201ENST00000516168 107 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 RNU2-10P-201ENST00000516375 211 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 RNU2-44P-201ENST00000516795 194 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 RNA5SP337-201ENST00000517007 109 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AP005639.2-201ENST00000527592 928 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 DUXAP5-201ENST00000529668 529 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 NDUFA5P6-201ENST00000542110 379 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AC135279.1-201ENST00000543493 504 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 PCMTD1P2-201ENST00000565017 355 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 MIR5697-201ENST00000578045 78 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AC093788.1-201ENST00000609356 927 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AP000240.1-201ENST00000609910 452 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AL391262.2-201ENST00000622466 494 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 AL354685.2-201ENST00000448218 1447 ntBASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
H3F3CQ6NXT2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 RNU1-57P-201ENST00000384491 166 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 RPL23AP39-201ENST00000415533 405 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AC114491.1-201ENST00000416095 246 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 RPL23AP30-201ENST00000432419 501 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AL512286.1-201ENST00000439244 400 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 MTND5P2-201ENST00000442927 1142 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AC104058.1-201ENST00000448028 297 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 snoU109.2-201ENST00000459316 135 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AC010587.1-201ENST00000505809 469 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AC091965.2-201ENST00000512324 613 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 RN7SKP265-201ENST00000516448 223 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 RNU6-667P-201ENST00000517186 102 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 MIR3683-201ENST00000580847 82 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 DEFB131E-202ENST00000602581 683 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AC126118.1-201ENST00000607744 628 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AC104010.1-201ENST00000616889 150 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
H3F3CQ6NXT2 Y_RNA.33-201ENST00000362591 102 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 SNORD56.2-201ENST00000363242 71 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 RNU6-39P-201ENST00000384344 107 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 RNU6-166P-201ENST00000384371 107 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 Y_RNA.534-201ENST00000384599 112 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 Y_RNA.560-201ENST00000384689 102 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 MIR1294-201ENST00000408503 142 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC016831.2-201ENST00000417179 352 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AL591704.1-201ENST00000432574 275 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AL008629.1-201ENST00000438615 184 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AL583843.1-201ENST00000456070 346 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC006512.1-201ENST00000468816 291 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 RPL7P43-201ENST00000478876 753 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC109927.2-201ENST00000506416 303 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC007375.1-201ENST00000554513 578 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AL157871.3-201ENST00000557231 293 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC136619.2-201ENST00000563361 631 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC024940.5-201ENST00000622889 474 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC092656.1-203ENST00000624134 423 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 AC090517.3-201ENST00000625170 141 ntBASIC1.7□□□□□ -2.14
H3F3CQ6NXT2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms