Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC040168.1-201ENST00000623594 991 ntBASIC-0.1□□□□□ -2.42
VPS13DQ5THJ4 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC004062.1-201ENST00000509926 645 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC016256.1-201ENST00000547971 354 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC092354.1-201ENST00000606057 376 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 RNU4-45P-201ENST00000365469 141 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC010409.1-201ENST00000487382 476 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC022447.1-201ENST00000515358 464 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC015849.6-201ENST00000605454 474 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 LARP7P1-201ENST00000605576 316 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AP005229.2-201ENST00000609980 697 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 RNU11-3P-201ENST00000391111 133 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 MTCO3P12-201ENST00000416718 547 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 HSPE1P9-201ENST00000440046 311 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 AC021506.2-201ENST00000612354 169 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 uc_338.15-201ENST00000615470 191 ntBASIC-0.1□□□□□ -2.43
VPS13DQ5THJ4 RNU4-48P-201ENST00000365559 182 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 LARP7P4-201ENST00000481075 878 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 SNORD116-28-201ENST00000516123 91 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 RNU6-902P-201ENST00000517212 91 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AL391834.1-201ENST00000609609 560 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AC244098.3-201ENST00000424803 96 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 C1DP1-201ENST00000426049 402 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 MRPS36P2-201ENST00000512569 299 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 RN7SKP277-201ENST00000516895 283 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AC004987.4-201ENST00000603383 338 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 BX284668.6-201ENST00000606899 438 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AC093913.1-201ENST00000614178 329 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 RNU6-793P-201ENST00000384233 104 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 RNU6-929P-201ENST00000384429 107 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 RNA5SP219-201ENST00000390940 113 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AL136372.1-201ENST00000403060 228 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 MTCO2P20-201ENST00000437339 673 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AC245047.7-201ENST00000440265 293 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 LDHBP3-201ENST00000514909 822 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AC090517.2-201ENST00000614966 680 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 AC068057.2-201ENST00000624047 895 ntBASIC-0.11□□□□□ -2.43
VPS13DQ5THJ4 MIR106A-201ENST00000384870 81 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AP1S2P1-201ENST00000457344 379 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 SNORD126-201ENST00000459475 77 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AC025465.4-201ENST00000513422 638 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 CENPUP1-201ENST00000526649 1202 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AP003973.1-201ENST00000604639 691 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 Pinc.1-201ENST00000616452 154 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 uc_338.34-201ENST00000617467 174 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 SNORD114-16-201ENST00000363044 70 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 SNORA12.1-201ENST00000390873 148 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AL589655.1-201ENST00000405398 482 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 RNA5SP227-201ENST00000516184 113 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AC097372.4-201ENST00000625025 466 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AL079343.1-201ENST00000572358 1771 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 MIR218-1-201ENST00000384999 110 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AC096531.1-201ENST00000419107 107 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AL589872.1-201ENST00000426602 288 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 RPS15AP5-201ENST00000436276 388 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 MTCYBP27-201ENST00000555160 670 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AL513185.3-201ENST00000433335 1300 ntBASIC-0.12□□□□□ -2.43
VPS13DQ5THJ4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 AL590556.1-201ENST00000423231 483 ntBASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 MTCO2P25-201ENST00000447065 681 ntBASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 AC074198.2-201ENST00000508153 258 ntBASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 SNORA68.3-201ENST00000515906 83 ntBASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 RN7SKP88-201ENST00000516847 250 ntBASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 AC008562.1-201ENST00000521763 330 ntBASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 IGKV1-22-201ENST00000524313 326 ntBASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.13□□□□□ -2.43
VPS13DQ5THJ4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms